PPA14290 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA14290 T305890_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.831 0.597
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA14290 Nuclear receptor 6 68

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
scaffold1278-EXSNAP2012.5 Pristionchus exspectatus scaffold1278-EXSNAP2012.5 N 0.908
L889_g6696 Steinernema feltiae L889_g6696 I 0.844
CRE30948 Caenorhabditis remanei CRE30948 I 0.841
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.831
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.830
L898_g12798 Steinernema monticolum L898_g12798 I 0.820
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.820
Minc14668 Meloidogyne incognita Minc14668 I 0.814
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.814
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.808
L898_g3512 Steinernema monticolum L898_g3512 I 0.792
scaffold861-EXSNAP2012.4 Pristionchus exspectatus scaffold861-EXSNAP2012.4 N 0.785
CBG09567 Caenorhabditis briggsae CBG09567 I 0.781
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.779
L892_g14834 Steinernema scapterisci L892_g14834 N 0.778
CJA09697 Caenorhabditis japonica CJA09697 I 0.774
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.764
CRE18430 Caenorhabditis remanei CRE18430 I 0.761
CBG06611 Caenorhabditis briggsae CBG06611 I 0.761
CBG06601 Caenorhabditis briggsae CBG06601 I 0.761
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.760
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.760
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.760
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.759
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.756
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.755