PPA17263 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA17263 T305899_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-46
M00692_2.00
Caenorhabditis elegans
NNNDWNHRN

NYDNWHNNN
PBM
Narasimhan et al.(2015)
pTH9924
0.916 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA17263 Nuclear receptor 20 90

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_22589 Ancylostoma caninum ANCCAN_22589 I 0.902
CBG19870 Caenorhabditis briggsae CBG19870 I 0.917
CBN08077 Caenorhabditis brenneri CBN08077 I 0.917
CBN16259 Caenorhabditis brenneri CBN16259 I 0.917
CJA19491 Caenorhabditis japonica CJA19491 I 0.917
CRE28659 Caenorhabditis remanei CRE28659 I 0.917
CRE30546 Caenorhabditis remanei CRE30546 I 0.917
L596_g14937 Steinernema carpocapsae L596_g14937 I 0.846
L889_g304 Steinernema feltiae L889_g304 I 0.846
L892_g3686 Steinernema scapterisci L892_g3686 I 0.846
L893_g13425 Steinernema glaseri L893_g13425 I 0.844
L898_g30036 Steinernema monticolum L898_g30036 I 0.846
PPA23171 Pristionchus pacificus PPA23171 N 0.882
PPA29597 Pristionchus pacificus PPA29597 I 0.772
scaffold19-EXSNAP2012.26 Pristionchus exspectatus scaffold19-EXSNAP2012.26 I 0.992
scaffold303-EXSNAP2012.4 Pristionchus exspectatus scaffold303-EXSNAP2012.4 I 0.989
scaffold731-EXSNAP2012.1 Pristionchus exspectatus scaffold731-EXSNAP2012.1 I 0.994
nhr-46 Caenorhabditis elegans WBGene00003636 D 0.916