Ppa-nhr-48 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA20177 T305904_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.883 0.657
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.794 0.757
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.794 0.757
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA20177 Nuclear receptor 4 73

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
scaffold1545-EXSNAP2012.2 Pristionchus exspectatus scaffold1545-EXSNAP2012.2 I 0.993
MhA1_Contig1158.frz3.gene18 Meloidogyne hapla MhA1_Contig1158.frz3.gene18 I 0.990
Minc18589 Meloidogyne incognita Minc18589 I 0.990
BXY_1432000 Bursaphelenchus xylophilus BXY_1432000 I 0.990
Minc13296 Meloidogyne incognita Minc13296 I 0.990
CBN06351 Caenorhabditis brenneri CBN06351 I 0.982
nhr-48 Caenorhabditis elegans WBGene00003638 I 0.982
CBG07759 Caenorhabditis briggsae CBG07759 I 0.982
CRE19106 Caenorhabditis remanei CRE19106 I 0.982
CJA03214 Caenorhabditis japonica CJA03214 I 0.982
DICVIV_03942 Dictyocaulus viviparus DICVIV_03942 I 0.979
NECAME_01947 Necator americanus NECAME_01947 I 0.979
SVUK_0001112701 Strongylus vulgaris SVUK_0001112701 I 0.979
HCOI01526000 Haemonchus contortus HCOI01526000 I 0.979
ACAC_0001358501 Angiostrongylus cantonensis ACAC_0001358501 I 0.979
TELCIR_04889 Teladorsagia circumcincta TELCIR_04889 I 0.979
SMUV_0000312501 Syphacia muris SMUV_0000312501 I 0.968
L893_g8292 Steinernema glaseri L893_g8292 I 0.958
L898_g1817 Steinernema monticolum L898_g1817 I 0.958
L892_g26350 Steinernema scapterisci L892_g26350 I 0.958
L596_g9326 Steinernema carpocapsae L596_g9326 I 0.958
HPLM_0001602501 Haemonchus placei HPLM_0001602501 I 0.952
PTRK_0001132000 Parastrongyloides trichosuri PTRK_0001132000 I 0.944
SSTP_0001272200 Strongyloides stercoralis SSTP_0001272200 I 0.943
SPAL_0000150000 Strongyloides papillosus SPAL_0000150000 I 0.943
SVE_0958300 Strongyloides venezuelensis SVE_0958300 I 0.943
ISCW009328 Ixodes scapularis ISCW009328 I 0.936
PPAI005921 Phlebotomus papatasi PPAI005921 I 0.913
AFAF019254 Anopheles farauti AFAF019254 I 0.908
ADIR005534 Anopheles dirus ADIR005534 I 0.905
CBN26095 Caenorhabditis brenneri CBN26095 I 0.905
ADAC003041 Anopheles darlingi ADAC003041 I 0.890
AALB008395 Anopheles albimanus AALB008395 I 0.890
CPIJ016038 Culex quinquefasciatus CPIJ016038 I 0.888
HR96 Aedes aegypti AAEL007202 I 0.888
CpipJ_CPIJ016038 Culex pipiens CpipJ_CPIJ016038 I 0.888
ACUA008166 Anopheles culicifacies ACUA008166 I 0.886
ACOM033140 Anopheles coluzzii ACOM033140 I 0.886
AATE006049 Anopheles atroparvus AATE006049 I 0.886
AARA011580 Anopheles arabiensis AARA011580 I 0.886
AQUA008824 Anopheles quadriannulatus AQUA008824 I 0.886
ASTEI03690 Anopheles stephensi ASTEI03690 I 0.886
AFUN010189 Anopheles funestus AFUN010189 I 0.886
AMEM008752 Anopheles merus AMEM008752 I 0.886
AGAP004224 Anopheles gambiae AGAP004224 I 0.886
AMIN004130 Anopheles minimus AMIN004130 I 0.886
AMEC016766 Anopheles melas AMEC016766 I 0.886
AMAM022585 Anopheles maculatus AMAM022585 I 0.886
ASIS011648 Anopheles sinensis ASIS011648 I 0.886
AEPI000232 Anopheles epiroticus AEPI000232 I 0.884
GM17786 Drosophila sechellia FBgn0172693 I 0.883
GI22223 Drosophila mojavensis FBgn0144951 I 0.883
GD21158 Drosophila simulans FBgn0192609 I 0.883
MDOA002084 Musca domestica MDOA002084 I 0.883
GF16320 Drosophila ananassae FBgn0093341 I 0.883
GA11197 Drosophila pseudoobscura FBgn0071252 I 0.883
Hr96 Drosophila grimshawi FBgn0020174 I 0.883
Hr96 Drosophila melanogaster FBgn0015240 D 0.883
GJ24344 Drosophila virilis FBgn0211424 I 0.883
GE23543 Drosophila yakuba FBgn0240719 I 0.883
LCUP002913 Lucilia cuprina LCUP002913 I 0.883
GG11347 Drosophila erecta FBgn0103647 I 0.883
HHAL000201-PA Halyomorpha halys HHAL000201-PA I 0.883
PHUM460970 Pediculus humanus PHUM460970 I 0.882
L798_15710 Zootermopsis nevadensis L798_15710 I 0.879
GK14276 Drosophila willistoni FBgn0216282 I 0.877
MCINX005291 Melitaea cinxia MCINX005291 I 0.874
tetur17g03630 Tetranychus urticae tetur17g03630 I 0.874
LDEC005794 Leptinotarsa decemlineata LDEC005794 I 0.874
YQE_04331 Dendroctonus ponderosae YQE_04331 I 0.864
ACOC_0000352001 Angiostrongylus costaricensis ACOC_0000352001 N 0.863
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I 0.862
TC010645 Tribolium castaneum TC010645 I 0.858
tetur34g00750 Tetranychus urticae tetur34g00750 I 0.855
CLEC000589 Cimex lectularius CLEC000589 I 0.855
ASU_08827 Ascaris suum ASU_08827 N 0.851
RPRC001794 Rhodnius prolixus RPRC001794 I 0.847
BGIBMGA010782 Bombyx mori BGIBMGA010782 I 0.835
HMEL016865 Heliconius melpomene HMEL016865 I 0.835
KGM_05575 Danaus plexippus KGM_05575 I 0.835
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I 0.833
SMAR007355 Strigamia maritima SMAR007355 I 0.833
Bm3787 Brugia malayi Bm3787 I 0.833
WUBG_13334 Wuchereria bancrofti WUBG_13334 I 0.833
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I 0.818
nDi.2.2.2.g04518 Dirofilaria immitis nDi.2.2.2.g04518 I 0.816
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I 0.810
NV10187 Nasonia vitripennis NV10187 I 0.810
GB52904 Apis mellifera GB52904 I 0.810
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I 0.803
GPUH_0001346001 Gongylonema pulchrum GPUH_0001346001 N 0.803
CJA11532 Caenorhabditis japonica CJA11532 I 0.794
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.794
CBG04512 Caenorhabditis briggsae CBG04512 I 0.794
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.794
CBN31767 Caenorhabditis brenneri CBN31767 I 0.794
CRE07237 Caenorhabditis remanei CRE07237 I 0.794
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.794
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.794
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.794
daf-12 Caenorhabditis elegans WBGene00000908 D 0.794
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.787
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.787
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.787
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.787
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.787
ASU_07898 Ascaris suum ASU_07898 I 0.787
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.787
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.787
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.787
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.787
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.787
L889_g10853 Steinernema feltiae L889_g10853 I 0.787
L898_g10498 Steinernema monticolum L898_g10498 I 0.787
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.787
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.787
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.787
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.787
LOAG_10538 Loa loa LOAG_10538 I 0.787
L596_g25556 Steinernema carpocapsae L596_g25556 I 0.775
augustus_masked-nMf.1.1.scaf52497-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf52497-processed-gene-0.0 N 0.772
L892_g14860 Steinernema scapterisci L892_g14860 I 0.768
ACEP16468 Atta cephalotes ACEP16468 I 0.765
L893_g16225 Steinernema glaseri L893_g16225 I 0.761
L892_g18386 Steinernema scapterisci L892_g18386 I 0.758
L893_g3995 Steinernema glaseri L893_g3995 I 0.754