PPA24481 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA24481 T305926_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.865 0.600
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.848 0.586
CBG23380
M01296_2.00
Caenorhabditis briggsae
NDBDHHANWN

NWNTDDHVHN
PBM
Lambert et al.(2019)
pTH11449
0.809 0.643
nhr-154
M00698_2.00
Caenorhabditis elegans
NRBRYCAHWD

HWDTGRYVYN
PBM
Narasimhan et al.(2015)
pTH10650
0.804 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA24481 Nuclear receptor 104 175

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

Invalid Input OrderBy

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action