Smp_016180 (Schistosoma mansoni)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 Smp_016180 T306010_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smp_016180
M02411_2.00		 Schistosoma mansoni
NGGACAYN
NRTGTCCN		 PBM
Weirauch et al.(2014)
pTH5566		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02411_2.00 Nuclear receptor 1 72

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_016180.1:pep Nuclear receptor 480 551

Links

Other Nuclear receptor family TFs
Other Schistosoma mansoni TFs

4 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SROB_0000414301 Schistosoma rodhaini SROB_0000414301 I 0.992
SMTD_0001518001 Schistosoma mattheei SMTD_0001518001 I 0.992
D915_05030 Fasciola hepatica D915_05030 I 0.991
csin112656 Clonorchis sinensis csin112656 I 0.991