SPU_011576 (Strongylocentrotus purpuratus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 SPU_011576 T306040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sex-1
M02416_2.00 		Caenorhabditis elegans
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH5667 		0.820 0.536
CBG17178
M02392_2.00 		Caenorhabditis briggsae
RAGGTCAH
DTGACCTY		 PBM
Weirauch et al.(2014)
pTH6634 		0.810 0.507
Eip78C
M06427_2.00 		Drosophila melanogaster
RGGTCA
TGACCY		 B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865 		0.772 0.493
Eip75B
M03928_2.00 		Drosophila melanogaster
MWVTAGGTCANN
NNTGACCTABWK		 SELEX
Nitta et al.(2015)
Eip75B_1 		0.765 0.565
Eip75B
M03929_2.00 		Drosophila melanogaster
AWNTRGGTCANTRGGTCA
TGACCYANTGACCYANWT		 SELEX
Nitta et al.(2015)
Eip75B_2 		0.765 0.565
Eip75B
M06416_2.00 		Drosophila melanogaster
KWWNTRGGTCA
TGACCYANWWM		 B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568 		0.765 0.565
Smp_105090
M02412_2.00 		Schistosoma mansoni
RGGTCANN
NNTGACCY		 PBM
Weirauch et al.(2014)
pTH6174 		0.763 0.536
RARG
M02397_2.00 		Homo sapiens
VGGTCANN
NNTGACCB		 PBM
Weirauch et al.(2014)
pTH5430 		0.752 0.551
Rarg
M00810_2.00 		Mus musculus
NNVGKTCANN
NNTGAMCBNN		 PBM
Weirauch et al.(2013)
pTH4269 		0.752 0.551
RARG
M03391_2.00 		Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS		 SELEX
Jolma et al.(2013)
RARG_1 		0.752 0.551
RARG
M03392_2.00 		Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_2 		0.752 0.551
RARG
M03393_2.00 		Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY		 SELEX
Jolma et al.(2013)
RARG_3 		0.752 0.551
RARG
M03394_2.00 		Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC		 SELEX
Jolma et al.(2013)
RARG_4 		0.752 0.551
RARG
M03395_2.00 		Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY		 SELEX
Jolma et al.(2013)
RARG_5 		0.752 0.551
RARG
M03396_2.00 		Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY		 SELEX
Jolma et al.(2013)
RARG_6 		0.752 0.551
Rarg
M03416_2.00 		Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
Rarg_1 		0.752 0.551
Rarg
M03417_2.00 		Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY		 SELEX
Jolma et al.(2013)
Rarg_2 		0.752 0.551
Rarg
M03418_2.00 		Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT		 SELEX
Jolma et al.(2013)
Rarg_3 		0.752 0.551
RARG
M05653_2.00 		Homo sapiens
NRGGTCANV
BNTGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX 		0.752 0.551
RARG
M05649_2.00 		Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1 		0.752 0.551
RARG
M05650_2.00 		Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY		 SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2 		0.752 0.551
Rarg
M05885_2.00 		Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN		 SMiLE-seq
Isakova et al.(2017)
RARg 		0.752 0.551
RARG
M09289_2.00 		Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B 		0.752 0.551
Rarg
M09300_2.00 		Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY		 Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C 		0.752 0.551
Rarg
M09613_2.00 		Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY		 Misc
Heinz et al.(2010)
ES-RARg_GSE30538 		0.752 0.551
RARG
M11167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RARG_Q3 		0.752 0.551
RARG
M05654_2.00 		Homo sapiens
NRGGTCRNV
BNYGACCYN		 SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX 		0.752 0.551
RARG
M05651_2.00 		Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1 		0.752 0.551
RARG
M05652_2.00 		Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH		 SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2 		0.752 0.551
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_011576-tr Nuclear receptor 108 176

Links

Other Nuclear receptor family TFs
Other Strongylocentrotus purpuratus TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
sex-1 Caenorhabditis elegans WBGene00004786 D 0.820
CBG17178 Caenorhabditis briggsae CBG17178 D 0.810
CJA05280 Caenorhabditis japonica CJA05280 I 0.805
CRE22690 Caenorhabditis remanei CRE22690 I 0.793
HDID_0000530301 Hymenolepis diminuta HDID_0000530301 I 0.778
EVEC_0000729501 Enterobius vermicularis EVEC_0000729501 I 0.778
HNAJ_0000981901 Hymenolepis nana HNAJ_0000981901 I 0.778
HmN_000080300 Hymenolepis microstoma HmN_000080300 I 0.778
D917_00646 Trichinella nativa D917_00646 I 0.776
EFV58163 Trichinella spiralis EFV58163 I 0.776
TMUE_s0030002800 Trichuris muris TMUE_s0030002800 I 0.776
nRc.2.0.1.g11663 Romanomermis culicivorax nRc.2.0.1.g11663 I 0.776
SMUV_0001106701 Syphacia muris SMUV_0001106701 I 0.774
GJ13880 Drosophila virilis FBgn0201099 I 0.772
GK16819 Drosophila willistoni FBgn0218819 I 0.772
GE19737 Drosophila yakuba FBgn0237070 I 0.772
tetur07g04810 Tetranychus urticae tetur07g04810 I 0.772
SMAR006046 Strigamia maritima SMAR006046 I 0.772
GD14944 Drosophila simulans FBgn0186616 I 0.772
CpipJ_CPIJ016641 Culex pipiens CpipJ_CPIJ016641 I 0.772
GF24303 Drosophila ananassae FBgn0101297 I 0.772
GA14768 Drosophila pseudoobscura FBgn0074795 I 0.772
GG16168 Drosophila erecta FBgn0108403 I 0.772
GH14972 Drosophila grimshawi FBgn0122447 I 0.772
GL24671 Drosophila persimilis FBgn0162259 I 0.772
GM22351 Drosophila sechellia FBgn0177221 I 0.772
LCUP006169 Lucilia cuprina LCUP006169 I 0.772
AMEC004804 Anopheles melas AMEC004804 I 0.772
AFAF020179 Anopheles farauti AFAF020179 I 0.772
AMEM011289 Anopheles merus AMEM011289 I 0.772
AQUA004679 Anopheles quadriannulatus AQUA004679 I 0.772
ASIS013439 Anopheles sinensis ASIS013439 I 0.772
ACUA025330 Anopheles culicifacies ACUA025330 I 0.772
Eip78C Drosophila melanogaster FBgn0004865 D 0.772
AALB005254 Anopheles albimanus AALB005254 I 0.772
MDOA000386 Musca domestica MDOA000386 I 0.772
AARA008449 Anopheles arabiensis AARA008449 I 0.772
AATE000381 Anopheles atroparvus AATE000381 I 0.772
ACOM039509 Anopheles coluzzii ACOM039509 I 0.772
Ocbimv22031632m.g Octopus bimaculoides Ocbimv22031632m.g I 0.772
GI13134 Drosophila mojavensis FBgn0135891 I 0.772
DAPPUDRAFT_8789 Daphnia pulex DAPPUDRAFT_8789 I 0.772
CPIJ016641 Culex quinquefasciatus CPIJ016641 I 0.772
ACYPI002307 Acyrthosiphon pisum ACYPI002307 I 0.772
AGAP006571 Anopheles gambiae AGAP006571 I 0.772
E78 Aedes aegypti AAEL000327 I 0.772
D915_01136 Fasciola hepatica D915_01136 I 0.767
CBN02985 Caenorhabditis brenneri CBN02985 I 0.766
nhr-23 Caenorhabditis elegans WBGene00003622 I 0.766
CJA19190 Caenorhabditis japonica CJA19190 I 0.766
CBN04090 Caenorhabditis brenneri CBN04090 I 0.766
PTRK_0000297600 Parastrongyloides trichosuri PTRK_0000297600 I 0.766
CRE07841 Caenorhabditis remanei CRE07841 I 0.766
CBG21929 Caenorhabditis briggsae CBG21929 I 0.766
SSTP_0000571300 Strongyloides stercoralis SSTP_0000571300 I 0.766
SPAL_0001289900 Strongyloides papillosus SPAL_0001289900 I 0.766
SVE_0162100 Strongyloides venezuelensis SVE_0162100 I 0.766
KGM_07609 Danaus plexippus KGM_07609 I 0.765
SMAR002622 Strigamia maritima SMAR002622 I 0.765
ISCW000630 Ixodes scapularis ISCW000630 I 0.765
MDOA007069 Musca domestica MDOA007069 I 0.765
CLEC025114 Cimex lectularius CLEC025114 I 0.765
Eip75B Drosophila melanogaster FBgn0000568 D 0.765
Hsal_04767--XP_393790.3_APIME Harpegnathos saltator Hsal_04767--XP_393790.3_APIME I 0.765
GD12358 Drosophila simulans FBgn0184090 I 0.765
GK20573 Drosophila willistoni FBgn0222569 I 0.765
E75 Aedes aegypti AAEL007397 I 0.765
DAPPUDRAFT_205205 Daphnia pulex DAPPUDRAFT_205205 I 0.765
CBN13485 Caenorhabditis brenneri CBN13485 I 0.765
Sjc_0057690 Schistosoma japonicum Sjc_0057690 I 0.763
Smp_105090 Schistosoma mansoni Smp_105090 D 0.763
csin106105 Clonorchis sinensis csin106105 I 0.763
T265_00408 Opisthorchis viverrini T265_00408 I 0.763
SROB_0001506101 Schistosoma rodhaini SROB_0001506101 I 0.763
SMTD_0001158701 Schistosoma mattheei SMTD_0001158701 I 0.763
A_05498 Schistosoma haematobium A_05498 I 0.763
tetur03g08440 Tetranychus urticae tetur03g08440 I 0.762
Ocbimv22019304m.g Octopus bimaculoides Ocbimv22019304m.g I 0.761
Sjc_0024820 Schistosoma japonicum Sjc_0024820 I 0.760
T265_12785 Opisthorchis viverrini T265_12785 I 0.760
A_00961 Schistosoma haematobium A_00961 I 0.760
TsM_000276000 Taenia solium TsM_000276000 I 0.760
Smp_000340 Schistosoma mansoni Smp_000340 I 0.760
EmuJ_001013700 Echinococcus multilocularis EmuJ_001013700 I 0.760
ECANG7_08070 Echinococcus canadensis ECANG7_08070 I 0.760
SSLN_0000812601 Schistocephalus solidus SSLN_0000812601 I 0.760
CGI_10028545 Crassostrea gigas CGI_10028545 I 0.759
BXY_0995200 Bursaphelenchus xylophilus BXY_0995200 I 0.755
BGLB004656 Biomphalaria glabrata BGLB004656 I 0.754
ASU_10228 Ascaris suum ASU_10228 I 0.753
HelroG90741 Helobdella robusta HelroG90741 I 0.753
estExt_fgenesh2_pg.C_3830006 Branchiostoma floridae estExt_fgenesh2_pg.C_3830006 I 0.752
fgenesh2_kg.scaffold_27000001 Branchiostoma floridae fgenesh2_kg.scaffold_27000001 I 0.752
Ogr09769 Ophisaurus gracilis Ogr09769 I 0.752
CapteG168520 Capitella teleta CapteG168520 I 0.752
Pvit_05786 Pogona vitticeps Pvit_05786 I 0.752
Myotis_brandtii_Rarg_10023003 Myotis brandtii Myotis_brandtii_Rarg_10023003 I 0.752
RARG Bos taurus ENSBTAG00000007592 I 0.752
ENSAMEG00000012299 Ailuropoda melanoleuca ENSAMEG00000012299 I 0.752
RARG Anolis carolinensis ENSACAG00000006832 I 0.752
RARG Callithrix jacchus ENSCJAG00000018408 I 0.752
RARG Canis familiaris ENSCAFG00000007050 I 0.752
RARG Cavia porcellus ENSCPOG00000014819 I 0.752
RARG Pteropus vampyrus ENSPVAG00000009374 I 0.752
RARG Pan troglodytes ENSPTRG00000005007 I 0.752
RARG Procavia capensis ENSPCAG00000012059 I 0.752
Rarg Rattus norvegicus ENSRNOG00000012499 I 0.752
ENSSHAG00000002378 Sarcophilus harrisii ENSSHAG00000002378 I 0.752
ENSP00000332695 Macaca fascicularis ENSP00000332695 I 0.752
ENSSTOG00000021101 Ictidomys tridecemlineatus ENSSTOG00000021101 I 0.752
RARG Sus scrofa ENSSSCG00000000258 I 0.752
ENSPANG00000022411 Papio anubis ENSPANG00000022411 I 0.752
RARG Ochotona princeps ENSOPRG00000005114 I 0.752
ENSMPUG00000006113 Mustela putorius furo ENSMPUG00000006113 I 0.752
RARG Macaca mulatta ENSMMUG00000022017 I 0.752
ENSMEUG00000005385 Macropus eugenii ENSMEUG00000005385 I 0.752
Rarg Mus musculus ENSMUSG00000001288 D 0.752
ENSOARG00000016626 Ovis aries ENSOARG00000016626 I 0.752
RARG Otolemur garnettii ENSOGAG00000026655 I 0.752
RARG Oryctolagus cuniculus ENSOCUG00000001432 I 0.752
ENSLACG00000016217 Latimeria chalumnae ENSLACG00000016217 I 0.752
RARG Tursiops truncatus ENSTTRG00000002778 I 0.752
RARG Equus caballus ENSECAG00000016596 I 0.752
RARG Homo sapiens ENSG00000172819 D 0.752
RARG Felis catus ENSFCAG00000005870 I 0.752
RARG Echinops telfairi ENSETEG00000001526 I 0.752
ENSCSAG00000005525 Chlorocebus sabaeus ENSCSAG00000005525 I 0.752
RARG Erinaceus europaeus ENSEEUG00000012904 I 0.752
Cmyd_10004695 Chelonia mydas Cmyd_10004695 I 0.752
ENSBTAP00000009984-D1 Bos grunniens ENSBTAP00000009984-D1 I 0.752
Alligator_sinensis_CCG005404.1 Alligator sinensis Alligator_sinensis_CCG005404.1 I 0.752
RARG Gorilla gorilla ENSGGOG00000003215 I 0.752
BGLB008862 Biomphalaria glabrata BGLB008862 I 0.751
rarga Oryzias latipes ENSORLG00000007861 I 0.750
rargb Oryzias latipes ENSORLG00000015382 I 0.750
rargb Danio rerio ENSDARG00000054003 I 0.750
rarga Danio rerio ENSDARG00000034117 I 0.750
ENSLOCG00000006240 Lepisosteus oculatus ENSLOCG00000006240 I 0.750
ENSONIG00000012223 Oreochromis niloticus ENSONIG00000012223 I 0.750
ENSONIG00000019165 Oreochromis niloticus ENSONIG00000019165 I 0.750
ENSPFOG00000002278 Poecilia formosa ENSPFOG00000002278 I 0.750
rarga Gasterosteus aculeatus ENSGACG00000009372 I 0.750
rarga Tetraodon nigroviridis ENSTNIG00000015051 I 0.750
rargb Takifugu rubripes ENSTRUG00000018545 I 0.750
ENSXMAG00000001599 Xiphophorus maculatus ENSXMAG00000001599 I 0.750
ENSPFOG00000002073 Poecilia formosa ENSPFOG00000002073 I 0.750
rargb Gasterosteus aculeatus ENSGACG00000000612 I 0.750
ENSGMOG00000017824 Gadus morhua ENSGMOG00000017824 I 0.750
ENSGMOG00000002298 Gadus morhua ENSGMOG00000002298 I 0.750
ENSAMXG00000024687 Astyanax mexicanus ENSAMXG00000024687 I 0.750
ENSXMAG00000002360 Xiphophorus maculatus ENSXMAG00000002360 I 0.750
LotgiG142734 Lottia gigantea LotgiG142734 I 0.748
ENSPMAG00000004911 Petromyzon marinus ENSPMAG00000004911 I 0.747