nhr-5 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003604 T306129_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-5
M00688_2.00		 Caenorhabditis elegans
NNRWGTACRSNN
NNSYGTACWYNN		 PBM
Narasimhan et al.(2015)
pTH10042		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00688_2.00 Nuclear receptor 41 110

DNA Binding Domains

Protein ID Domain From To Sequence
Y73F8A.21a Nuclear receptor 41 110
Y73F8A.21c Nuclear receptor 41 110

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

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9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action