nhr-34 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003627 T306152_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00		 Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.829 0.557
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.747 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00690_2.00 Nuclear receptor 51 120

DNA Binding Domains

Protein ID Domain From To Sequence
F58G6.5a Nuclear receptor 17 86
F58G6.5b Nuclear receptor 131 200
F58G6.5c Nuclear receptor 149 218
F58G6.5d Nuclear receptor 81 150

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG22587 Caenorhabditis briggsae CBG22587 I 0.992
CRE10779 Caenorhabditis remanei CRE10779 I 0.992
CRE07033 Caenorhabditis remanei CRE07033 I 0.992
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.991
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.991
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.991
NECAME_02375 Necator americanus NECAME_02375 I 0.991
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.991
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.991
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.991
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.991
CJA14248 Caenorhabditis japonica CJA14248 I 0.989
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.989
L893_g263 Steinernema glaseri L893_g263 I 0.989
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.989
L898_g11608 Steinernema monticolum L898_g11608 I 0.989
L889_g31970 Steinernema feltiae L889_g31970 I 0.989
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.987
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.987
ASU_00971 Ascaris suum ASU_00971 I 0.987
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.986
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.985
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.985
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.983
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.983
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.983
CRE09416 Caenorhabditis remanei CRE09416 I 0.977
CBG14996 Caenorhabditis briggsae CBG14996 I 0.966
CRE07035 Caenorhabditis remanei CRE07035 I 0.954
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.950
CJA18307 Caenorhabditis japonica CJA18307 I 0.948
CBN21958 Caenorhabditis brenneri CBN21958 I 0.944
CBN00088 Caenorhabditis brenneri CBN00088 I 0.944
L892_g3438 Steinernema scapterisci L892_g3438 I 0.944
L893_g33656 Steinernema glaseri L893_g33656 I 0.944
L898_g9613 Steinernema monticolum L898_g9613 I 0.944
L889_g15424 Steinernema feltiae L889_g15424 I 0.944
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.943
CRE07034 Caenorhabditis remanei CRE07034 I 0.939
CBG14997 Caenorhabditis briggsae CBG14997 I 0.938
CBG13142 Caenorhabditis briggsae CBG13142 I 0.931
CBN04415 Caenorhabditis brenneri CBN04415 I 0.931
CRE26423 Caenorhabditis remanei CRE26423 I 0.931
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.931
CBN32300 Caenorhabditis brenneri CBN32300 I 0.931
CJA02727 Caenorhabditis japonica CJA02727 I 0.930
CJA19445 Caenorhabditis japonica CJA19445 I 0.925
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.925
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.924
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.924
CRE08264 Caenorhabditis remanei CRE08264 I 0.924
CBG03860 Caenorhabditis briggsae CBG03860 I 0.924
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.924
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.924
CBN05776 Caenorhabditis brenneri CBN05776 I 0.924
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.924
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.919
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.917
L893_g5404 Steinernema glaseri L893_g5404 I 0.917
L892_g17832 Steinernema scapterisci L892_g17832 I 0.917
L889_g366 Steinernema feltiae L889_g366 I 0.917
CJA39530 Caenorhabditis japonica CJA39530 I 0.916
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.915
L898_g5338 Steinernema monticolum L898_g5338 I 0.907
L889_g16305 Steinernema feltiae L889_g16305 I 0.907
L893_g6565 Steinernema glaseri L893_g6565 I 0.907
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.907
L892_g17146 Steinernema scapterisci L892_g17146 I 0.907
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.900
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.900
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.900
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.900
CBN28641 Caenorhabditis brenneri CBN28641 I 0.900
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.900
CJA14611 Caenorhabditis japonica CJA14611 I 0.900
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.900
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.900
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.900
CBG03466 Caenorhabditis briggsae CBG03466 I 0.900
CRE29874 Caenorhabditis remanei CRE29874 I 0.900
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.894
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.884
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.879
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.869
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.866
CJA06107 Caenorhabditis japonica CJA06107 I 0.866
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.863
CBG04240 Caenorhabditis briggsae CBG04240 I 0.859
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.855
L889_g2977 Steinernema feltiae L889_g2977 I 0.855
L898_g32368 Steinernema monticolum L898_g32368 I 0.855
L892_g23093 Steinernema scapterisci L892_g23093 I 0.855
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.854
CRE22212 Caenorhabditis remanei CRE22212 I 0.849
CRE24933 Caenorhabditis remanei CRE24933 I 0.848
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.847
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.841
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.840
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.834
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.834
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.834
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.834
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.831
CBG22776 Caenorhabditis briggsae CBG22776 I 0.831
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.831
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.831
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.831
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.831
LOAG_07549 Loa loa LOAG_07549 I 0.831
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.831
CRE21925 Caenorhabditis remanei CRE21925 I 0.831
CJA14035 Caenorhabditis japonica CJA14035 I 0.831
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.831
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.831
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.831
CBN08474 Caenorhabditis brenneri CBN08474 I 0.831
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.831
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.831
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.831
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.831
Bm5457 Brugia malayi Bm5457 I 0.831
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.829
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.829
L889_g25097 Steinernema feltiae L889_g25097 I 0.826
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.826
L892_g186 Steinernema scapterisci L892_g186 I 0.826
L898_g18440 Steinernema monticolum L898_g18440 I 0.826
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.817
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.817
L893_g6023 Steinernema glaseri L893_g6023 I 0.812
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.811
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.806
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.801
Minc11307 Meloidogyne incognita Minc11307 I 0.798
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.793
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.784
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.784
SMUV_0001036101 Syphacia muris SMUV_0001036101 I 0.775
PPA14696 Pristionchus pacificus PPA14696 I 0.773
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.765
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.765
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.765
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.765
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.765
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.759
BXY_0791000 Bursaphelenchus xylophilus BXY_0791000 I 0.756
NR2E3 Sus scrofa ENSSSCG00000004978 I 0.751
ENSMEUG00000016597 Macropus eugenii ENSMEUG00000016597 I 0.750
NR2E3 Monodelphis domestica ENSMODG00000001949 I 0.750
BXY_0816300 Bursaphelenchus xylophilus BXY_0816300 I 0.748
NR2E3 Tupaia belangeri ENSTBEG00000011672 I 0.747
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.746
L893_g21283 Steinernema glaseri L893_g21283 I 0.745
L889_g11570 Steinernema feltiae L889_g11570 I 0.745
L898_g23058 Steinernema monticolum L898_g23058 I 0.745