nhr-34 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003627 T306152_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00		 Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.829 0.557
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.747 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00690_2.00 Nuclear receptor 51 120

DNA Binding Domains

Protein ID Domain From To Sequence
F58G6.5a Nuclear receptor 17 86
F58G6.5b Nuclear receptor 131 200
F58G6.5c Nuclear receptor 149 218
F58G6.5d Nuclear receptor 81 150

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

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156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action