nhr-61 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003651 T306175_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.866 0.657
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
W01D2.2a.1 Nuclear receptor 28 97
W01D2.2a.2 Nuclear receptor 28 97
W01D2.2a.3 Nuclear receptor 28 97
W01D2.2b.1 Nuclear receptor 28 97
W01D2.2b.2 Nuclear receptor 28 97
W01D2.2b.3 Nuclear receptor 28 97

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

137 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA06107 Caenorhabditis japonica CJA06107 I 0.993
CRE24933 Caenorhabditis remanei CRE24933 I 0.986
CRE26423 Caenorhabditis remanei CRE26423 I 0.982
CBN32300 Caenorhabditis brenneri CBN32300 I 0.982
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.982
CBN04415 Caenorhabditis brenneri CBN04415 I 0.982
CBG13142 Caenorhabditis briggsae CBG13142 I 0.982
CJA02727 Caenorhabditis japonica CJA02727 I 0.979
CBG04240 Caenorhabditis briggsae CBG04240 I 0.979
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.959
CRE29874 Caenorhabditis remanei CRE29874 I 0.959
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.959
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.959
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.959
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.959
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.959
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.959
CBN28641 Caenorhabditis brenneri CBN28641 I 0.959
CBG03466 Caenorhabditis briggsae CBG03466 I 0.959
CJA14611 Caenorhabditis japonica CJA14611 I 0.959
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.955
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.951
L892_g17832 Steinernema scapterisci L892_g17832 I 0.951
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.950
L892_g3438 Steinernema scapterisci L892_g3438 I 0.949
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.948
L898_g9613 Steinernema monticolum L898_g9613 I 0.943
L889_g15424 Steinernema feltiae L889_g15424 I 0.942
L893_g33656 Steinernema glaseri L893_g33656 I 0.942
L889_g366 Steinernema feltiae L889_g366 I 0.942
L893_g5404 Steinernema glaseri L893_g5404 I 0.942
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.938
CRE22212 Caenorhabditis remanei CRE22212 I 0.937
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.927
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.927
L892_g17146 Steinernema scapterisci L892_g17146 I 0.927
L889_g16305 Steinernema feltiae L889_g16305 I 0.927
L898_g5338 Steinernema monticolum L898_g5338 I 0.927
L893_g6565 Steinernema glaseri L893_g6565 I 0.927
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.924
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.922
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.920
CJA19445 Caenorhabditis japonica CJA19445 I 0.918
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.917
CBG03860 Caenorhabditis briggsae CBG03860 I 0.917
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.917
CBN05776 Caenorhabditis brenneri CBN05776 I 0.917
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.917
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.917
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.917
CRE08264 Caenorhabditis remanei CRE08264 I 0.917
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.916
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.914
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.899
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.897
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.897
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.897
L893_g263 Steinernema glaseri L893_g263 I 0.889
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.889
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.889
ASU_00971 Ascaris suum ASU_00971 I 0.889
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.889
L898_g11608 Steinernema monticolum L898_g11608 I 0.889
L889_g31970 Steinernema feltiae L889_g31970 I 0.889
CJA14248 Caenorhabditis japonica CJA14248 I 0.886
PPA14696 Pristionchus pacificus PPA14696 I 0.879
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.875
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.870
MhA1_Contig1031.frz3.gene17 Meloidogyne hapla MhA1_Contig1031.frz3.gene17 N 0.869
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.866
CBG22587 Caenorhabditis briggsae CBG22587 I 0.863
CRE07033 Caenorhabditis remanei CRE07033 I 0.863
CRE10779 Caenorhabditis remanei CRE10779 I 0.863
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.858
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.858
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.858
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.858
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.857
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.857
CBN08474 Caenorhabditis brenneri CBN08474 I 0.855
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.855
LOAG_07549 Loa loa LOAG_07549 I 0.855
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.855
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.855
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.855
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.855
L898_g18440 Steinernema monticolum L898_g18440 I 0.855
L892_g186 Steinernema scapterisci L892_g186 I 0.855
CRE21925 Caenorhabditis remanei CRE21925 I 0.855
CJA14035 Caenorhabditis japonica CJA14035 I 0.855
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.855
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.855
Bm5457 Brugia malayi Bm5457 I 0.855
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.855
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.855
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.855
CBG22776 Caenorhabditis briggsae CBG22776 I 0.855
L889_g25097 Steinernema feltiae L889_g25097 I 0.855
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.855
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.855
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.855
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.852
NECAME_02375 Necator americanus NECAME_02375 I 0.852
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.852
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.852
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.852
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.852
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.852
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.851
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.850
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.848
L892_g23093 Steinernema scapterisci L892_g23093 I 0.848
L889_g2977 Steinernema feltiae L889_g2977 I 0.845
L898_g32368 Steinernema monticolum L898_g32368 I 0.845
CBG14996 Caenorhabditis briggsae CBG14996 I 0.844
L893_g6023 Steinernema glaseri L893_g6023 I 0.843
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.842
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.833
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.830
CRE09416 Caenorhabditis remanei CRE09416 I 0.823
SMUV_0001036101 Syphacia muris SMUV_0001036101 I 0.822
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.810
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.801
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.801
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.801
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.801
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.801
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.793
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.785
Minc11307 Meloidogyne incognita Minc11307 I 0.772
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.767
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.766
CJA18307 Caenorhabditis japonica CJA18307 I 0.764
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.762
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.755
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.753