nhr-66 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003656 T306180_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-66
M00694_2.00
Caenorhabditis elegans
NNNNYRTABY

RVTAYRNNNN
PBM
Narasimhan et al.(2015)
pTH10034
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00694_2.00 Nuclear receptor 51 122

DNA Binding Domains

Protein ID Domain From To Sequence
T09A12.4a Nuclear receptor 111 182
T09A12.4b Nuclear receptor 60 131
T09A12.4c Nuclear receptor 267 338
T09A12.4d Nuclear receptor 193 264
T09A12.4e Nuclear receptor 53 124
T09A12.4f Nuclear receptor 265 336
T09A12.4g Nuclear receptor 191 262
T09A12.4h Nuclear receptor 113 184
T09A12.4i Nuclear receptor 51 122
T09A12.4j Nuclear receptor 62 133

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CJA01363 Caenorhabditis japonica CJA01363 I 0.987
CBG01574 Caenorhabditis briggsae CBG01574 I 0.986
CRE21648 Caenorhabditis remanei CRE21648 I 0.986
CBN13407 Caenorhabditis brenneri CBN13407 I 0.986
CBN04328 Caenorhabditis brenneri CBN04328 I 0.986
L892_g30707 Steinernema scapterisci L892_g30707 I 0.969
L889_g25034 Steinernema feltiae L889_g25034 I 0.969
L596_g2297 Steinernema carpocapsae L596_g2297 I 0.969
L898_g10100 Steinernema monticolum L898_g10100 I 0.969
L893_g14553 Steinernema glaseri L893_g14553 I 0.969
Ppa-nhr-66 Pristionchus pacificus PPA17245 I 0.960
CRE10181 Caenorhabditis remanei CRE10181 I 0.883