CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-97
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00003687
T306209_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
H27C11.1a
Nuclear receptor
33
103
ALCVVCGDRACSHLYYGVAACHGCKCFFWRTVKSRLNYVCRYGGNCSISTAGRNACRYCRFHRCLFVGMKI
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
98 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN08571
Caenorhabditis brenneri
CBN08571
I
0.996
CBN10811
Caenorhabditis brenneri
CBN10811
I
0.996
CRE14116
Caenorhabditis remanei
CRE14116
I
0.996
CBG15006
Caenorhabditis briggsae
CBG15006
I
0.996
CRE09911
Caenorhabditis remanei
CRE09911
I
0.996
HCOI02063800
Haemonchus contortus
HCOI02063800
N
0.994
CJA03362
Caenorhabditis japonica
CJA03362
N
0.994
HCOI00878400
Haemonchus contortus
HCOI00878400
N
0.994
HCOI02063200
Haemonchus contortus
HCOI02063200
N
0.994
HCOI02063400
Haemonchus contortus
HCOI02063400
N
0.994
HCOI02064100
Haemonchus contortus
HCOI02064100
N
0.994
HCOI02063000
Haemonchus contortus
HCOI02063000
N
0.994
SSTP_0000433200
Strongyloides stercoralis
SSTP_0000433200
I
0.982
SVE_0662100
Strongyloides venezuelensis
SVE_0662100
I
0.981
RSKR_0000862400
Rhabditophanes kr3021
RSKR_0000862400
N
0.981
SPAL_0001690000
Strongyloides papillosus
SPAL_0001690000
I
0.981
PTRK_0000785300
Parastrongyloides trichosuri
PTRK_0000785300
I
0.979
ASIM_0000041701
Anisakis simplex
ASIM_0000041701
N
0.943
TCNE_0000088101
Toxocara canis
TCNE_0000088101
N
0.935
BXY_0179600
Bursaphelenchus xylophilus
BXY_0179600
I
0.935
HPBE_0002162901
Heligmosomoides bakeri
HPBE_0002162901
N
0.910
OESDEN_16690
Oesophagostomum dentatum
OESDEN_16690
N
0.908
SVUK_0000487901
Strongylus vulgaris
SVUK_0000487901
N
0.908
ANCDUO_22516
Ancylostoma duodenale
ANCDUO_22516
N
0.908
L889_g23169
Steinernema feltiae
L889_g23169
N
0.896
L596_g25326
Steinernema carpocapsae
L596_g25326
N
0.896
L892_g27553
Steinernema scapterisci
L892_g27553
N
0.896
L898_g11980
Steinernema monticolum
L898_g11980
N
0.896
L893_g2097
Steinernema glaseri
L893_g2097
N
0.896
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.867
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.867
GPLIN_000686000
Globodera pallida
GPLIN_000686000
N
0.866
CJA04720
Caenorhabditis japonica
CJA04720
I
0.856
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.856
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.854
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.854
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.854
CRE06667
Caenorhabditis remanei
CRE06667
I
0.854
Minc11986
Meloidogyne incognita
Minc11986
I
0.842
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf00383-processed-gene-0.1
I
0.842
NECAME_05125
Necator americanus
NECAME_05125
I
0.833
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.833
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.833
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.833
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.833
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.819
Bm12053
Brugia malayi
Bm12053
I
0.819
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.819
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.819
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.819
Bm4894
Brugia malayi
Bm4894
I
0.819
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.819
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.819
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.819
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.819
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.819
LOAG_05485
Loa loa
LOAG_05485
I
0.819
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.819
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.817
L893_g6878
Steinernema glaseri
L893_g6878
I
0.809
Sakowv30008100m.g
Saccoglossus kowalevskii
Sakowv30008100m.g
I
0.786
Bm3989
Brugia malayi
Bm3989
I
0.784
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
0.781
Minc15420
Meloidogyne incognita
Minc15420
I
0.781
L596_g27086
Steinernema carpocapsae
L596_g27086
I
0.767
L898_g4801
Steinernema monticolum
L898_g4801
I
0.764
L889_g29204
Steinernema feltiae
L889_g29204
I
0.764
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
0.764
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
0.764
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
0.764
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
0.764
SPU_021289
Strongylocentrotus purpuratus
SPU_021289
I
0.757
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.755
PPA21285
Pristionchus pacificus
PPA21285
I
0.755
AMIN000644
Anopheles minimus
AMIN000644
I
0.747
USP
Anopheles gambiae
AGAP002095
I
0.747
AMEC022423
Anopheles melas
AMEC022423
I
0.747
ADAC008563
Anopheles darlingi
ADAC008563
I
0.747
AMEM008174
Anopheles merus
AMEM008174
I
0.747
ACYPI005934
Acyrthosiphon pisum
ACYPI005934
I
0.747
ASTEI00398
Anopheles stephensi
ASTEI00398
I
0.747
AQUA008924
Anopheles quadriannulatus
AQUA008924
I
0.747
USP
Aedes aegypti
AAEL000395
I
0.747
CpipJ_CPIJ016024
Culex pipiens
CpipJ_CPIJ016024
I
0.747
AMEC013916
Anopheles melas
AMEC013916
I
0.747
AFAF008350
Anopheles farauti
AFAF008350
I
0.747
AARA006848
Anopheles arabiensis
AARA006848
I
0.747
L798_09225
Zootermopsis nevadensis
L798_09225
I
0.747
AALB002625
Anopheles albimanus
AALB002625
I
0.747
YQE_09004
Dendroctonus ponderosae
YQE_09004
I
0.747
TC014027
Tribolium castaneum
TC014027
I
0.747
ACOM042234
Anopheles coluzzii
ACOM042234
I
0.747
ACUA020556
Anopheles culicifacies
ACUA020556
I
0.747
ASIS007484
Anopheles sinensis
ASIS007484
I
0.747
AEPI005174
Anopheles epiroticus
AEPI005174
I
0.747
ADIR003190
Anopheles dirus
ADIR003190
I
0.747
CPIJ016024
Culex quinquefasciatus
CPIJ016024
I
0.747
AFUN009463
Anopheles funestus
AFUN009463
I
0.747