nhr-100 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003690 T306212_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in anatomical structure development; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in terminal bulb. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.915 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
C28D4.1 Nuclear receptor 22 91

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA39530 Caenorhabditis japonica CJA39530 I 0.995
CRE07035 Caenorhabditis remanei CRE07035 I 0.985
CJA11132 Caenorhabditis japonica CJA11132 N 0.981
CBG14997 Caenorhabditis briggsae CBG14997 I 0.979
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.967
CBN00088 Caenorhabditis brenneri CBN00088 I 0.931
CBN21958 Caenorhabditis brenneri CBN21958 I 0.931
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.923
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.923
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.923
ASU_00971 Ascaris suum ASU_00971 I 0.923
NECAME_02375 Necator americanus NECAME_02375 I 0.920
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.918
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.918
CRE10779 Caenorhabditis remanei CRE10779 I 0.917
CRE07033 Caenorhabditis remanei CRE07033 I 0.917
CJA14248 Caenorhabditis japonica CJA14248 I 0.917
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.917
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.917
CBG22587 Caenorhabditis briggsae CBG22587 I 0.917
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.915
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.915
L893_g263 Steinernema glaseri L893_g263 I 0.915
L889_g31970 Steinernema feltiae L889_g31970 I 0.915
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.915
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.915
L898_g11608 Steinernema monticolum L898_g11608 I 0.915
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.915
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.915
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.908
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.908
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.908
CRE09416 Caenorhabditis remanei CRE09416 I 0.904
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.903
CBG14996 Caenorhabditis briggsae CBG14996 I 0.893
CRE07034 Caenorhabditis remanei CRE07034 I 0.890
BXY_0019500 Bursaphelenchus xylophilus BXY_0019500 N 0.887
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.877
CJA18307 Caenorhabditis japonica CJA18307 I 0.874
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.851
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.814
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.814
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.814
CBN05776 Caenorhabditis brenneri CBN05776 I 0.813
CJA19445 Caenorhabditis japonica CJA19445 I 0.813
CRE08264 Caenorhabditis remanei CRE08264 I 0.813
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.813
CBG03860 Caenorhabditis briggsae CBG03860 I 0.813
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.813
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.803
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.797
CRE22212 Caenorhabditis remanei CRE22212 I 0.795
L892_g17832 Steinernema scapterisci L892_g17832 I 0.789
L893_g5404 Steinernema glaseri L893_g5404 I 0.789
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.789
L889_g366 Steinernema feltiae L889_g366 I 0.789
L889_g16305 Steinernema feltiae L889_g16305 I 0.778
L893_g6565 Steinernema glaseri L893_g6565 I 0.778
L898_g5338 Steinernema monticolum L898_g5338 I 0.778
L892_g17146 Steinernema scapterisci L892_g17146 I 0.777
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.777
BXY_0816300 Bursaphelenchus xylophilus BXY_0816300 I 0.765
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.762
CBN28641 Caenorhabditis brenneri CBN28641 I 0.754
L898_g9613 Steinernema monticolum L898_g9613 I 0.754
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.754
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.754
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.754
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.754
CRE29874 Caenorhabditis remanei CRE29874 I 0.754
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.754
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.754
CBG03466 Caenorhabditis briggsae CBG03466 I 0.754
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.754
L892_g3438 Steinernema scapterisci L892_g3438 I 0.754
CJA02727 Caenorhabditis japonica CJA02727 I 0.754
CJA14611 Caenorhabditis japonica CJA14611 I 0.754
L889_g15424 Steinernema feltiae L889_g15424 I 0.753
L893_g33656 Steinernema glaseri L893_g33656 I 0.753
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.751
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.750
CBG13142 Caenorhabditis briggsae CBG13142 I 0.748
CBN04415 Caenorhabditis brenneri CBN04415 I 0.748
CRE26423 Caenorhabditis remanei CRE26423 I 0.748
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.748
CBN32300 Caenorhabditis brenneri CBN32300 I 0.748