nhr-138 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00003728 T306250_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.950 0.657
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
C28D4.9 Nuclear receptor 13 82

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CJA18307 Caenorhabditis japonica CJA18307 I 0.990
CRE07034 Caenorhabditis remanei CRE07034 I 0.983
CRE09416 Caenorhabditis remanei CRE09416 I 0.966
CBG14996 Caenorhabditis briggsae CBG14996 I 0.958
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.950
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.950
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.950
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.950
CRE07033 Caenorhabditis remanei CRE07033 I 0.949
CRE10779 Caenorhabditis remanei CRE10779 I 0.949
CBG22587 Caenorhabditis briggsae CBG22587 I 0.949
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.948
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.948
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.948
NECAME_02375 Necator americanus NECAME_02375 I 0.948
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.948
scaffold52-EXSNAP2012.30 Pristionchus exspectatus scaffold52-EXSNAP2012.30 I 0.945
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.945
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.943
L893_g263 Steinernema glaseri L893_g263 I 0.939
L898_g11608 Steinernema monticolum L898_g11608 I 0.939
L889_g31970 Steinernema feltiae L889_g31970 I 0.939
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.939
ASU_00971 Ascaris suum ASU_00971 I 0.939
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.939
CJA14248 Caenorhabditis japonica CJA14248 I 0.937
CBN00088 Caenorhabditis brenneri CBN00088 I 0.924
CRE07035 Caenorhabditis remanei CRE07035 I 0.924
CBN21958 Caenorhabditis brenneri CBN21958 I 0.924
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.923
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.923
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.923
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.918
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.906
CBG14997 Caenorhabditis briggsae CBG14997 I 0.892
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.877
CJA39530 Caenorhabditis japonica CJA39530 I 0.869
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.856
L892_g3438 Steinernema scapterisci L892_g3438 I 0.848
L898_g9613 Steinernema monticolum L898_g9613 I 0.848
L893_g33656 Steinernema glaseri L893_g33656 I 0.847
L889_g15424 Steinernema feltiae L889_g15424 I 0.847
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.845
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.845
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.843
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.843
CJA02727 Caenorhabditis japonica CJA02727 I 0.835
CBG13142 Caenorhabditis briggsae CBG13142 I 0.829
CBN32300 Caenorhabditis brenneri CBN32300 I 0.829
CRE26423 Caenorhabditis remanei CRE26423 I 0.829
CBN04415 Caenorhabditis brenneri CBN04415 I 0.829
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.798
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.797
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.786
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.786
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.786
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.786
CRE08264 Caenorhabditis remanei CRE08264 I 0.785
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.785
CBG03860 Caenorhabditis briggsae CBG03860 I 0.785
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.785
CJA19445 Caenorhabditis japonica CJA19445 I 0.785
CBN05776 Caenorhabditis brenneri CBN05776 I 0.785
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.778
L892_g23093 Steinernema scapterisci L892_g23093 I 0.778
L889_g2977 Steinernema feltiae L889_g2977 I 0.777
L898_g32368 Steinernema monticolum L898_g32368 I 0.775
CJA06107 Caenorhabditis japonica CJA06107 I 0.762
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.762
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.757
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.747
L892_g17832 Steinernema scapterisci L892_g17832 I 0.747
L893_g5404 Steinernema glaseri L893_g5404 I 0.747
L889_g366 Steinernema feltiae L889_g366 I 0.747