CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-30
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00016091
T306322_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C25E10.1
Nuclear receptor
4
74
STCKICGLAAHGVHFGVTACRACAAFFRRFVVLNLEYECLKDEIKCNLNKIRRSSCRHCRFQKCLRMGMTA
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG04928
Caenorhabditis briggsae
CBG04928
I
0.972
NBR_0001834701
Nippostrongylus brasiliensis
NBR_0001834701
I
0.813
L889_g6696
Steinernema feltiae
L889_g6696
I
0.756
HPBE_0001646201
Heligmosomoides bakeri
HPBE_0001646201
I
0.822
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
0.784
nhr-213
Caenorhabditis elegans
WBGene00011520
I
0.800
CRE15097
Caenorhabditis remanei
CRE15097
I
0.986
CRE13011
Caenorhabditis remanei
CRE13011
I
0.904
CRE12950
Caenorhabditis remanei
CRE12950
I
0.745
CRE10693
Caenorhabditis remanei
CRE10693
I
0.986
CRE08691
Caenorhabditis remanei
CRE08691
I
0.762
CBN13200
Caenorhabditis brenneri
CBN13200
I
0.987
CBN00434
Caenorhabditis brenneri
CBN00434
I
0.947
CBG19169
Caenorhabditis briggsae
CBG19169
I
0.979
CBG16982
Caenorhabditis briggsae
CBG16982
I
0.877
CBG09567
Caenorhabditis briggsae
CBG09567
I
0.785
CBG04929
Caenorhabditis briggsae
CBG04929
I
0.947
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
0.752