nhr-36 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00017198 T306336_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in anatomical structure development; cell differentiation; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in amphid neurons. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-36
M02418_2.00		 Caenorhabditis elegans
NNRDMDCRNN
NNYGHKHYNN		 PBM
Weirauch et al.(2014)
pTH6508		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02418_2.00 Nuclear receptor 1 72

DNA Binding Domains

Protein ID Domain From To Sequence
F07C3.10 Nuclear receptor 34 105

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE19708 Caenorhabditis remanei CRE19708 I 0.981
CBG19242 Caenorhabditis briggsae CBG19242 I 0.966
CBN28514 Caenorhabditis brenneri CBN28514 I 0.961
SSTP_0000433200 Strongyloides stercoralis SSTP_0000433200 I 0.802
SPAL_0001690000 Strongyloides papillosus SPAL_0001690000 I 0.786
SVE_0662100 Strongyloides venezuelensis SVE_0662100 I 0.786
PTRK_0000785300 Parastrongyloides trichosuri PTRK_0000785300 I 0.772
BXY_0179600 Bursaphelenchus xylophilus BXY_0179600 I 0.764