nhr-142 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00018430 T306348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00		 Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.866 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00703_2.00 Nuclear receptor 24 94

DNA Binding Domains

Protein ID Domain From To Sequence
F44E7.8a Nuclear receptor 24 94
F44E7.8b Nuclear receptor 48 118

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN28290 Caenorhabditis brenneri CBN28290 I 0.991
CBN21486 Caenorhabditis brenneri CBN21486 I 0.991
CRE31070 Caenorhabditis remanei CRE31070 I 0.987
CBG09320 Caenorhabditis briggsae CBG09320 I 0.987
CJA28065 Caenorhabditis japonica CJA28065 I 0.984
CRE18430 Caenorhabditis remanei CRE18430 I 0.936
CBG06601 Caenorhabditis briggsae CBG06601 I 0.935
CBG06611 Caenorhabditis briggsae CBG06611 I 0.935
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.924
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.917
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.912
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.912
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.912
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.912
CJA09697 Caenorhabditis japonica CJA09697 I 0.912
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.909
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.909
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.906
CBG22870 Caenorhabditis briggsae CBG22870 I 0.904
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.904
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.903
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.899
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.899
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.890
CBG20727 Caenorhabditis briggsae CBG20727 I 0.889
CBG09567 Caenorhabditis briggsae CBG09567 I 0.889
CRE30948 Caenorhabditis remanei CRE30948 I 0.888
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.888
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.885
CBG20729 Caenorhabditis briggsae CBG20729 I 0.877
L898_g3512 Steinernema monticolum L898_g3512 I 0.877
CBN23838 Caenorhabditis brenneri CBN23838 I 0.871
CRE15644 Caenorhabditis remanei CRE15644 I 0.871
CRE15675 Caenorhabditis remanei CRE15675 I 0.871
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.868
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.866
nhr-218 Caenorhabditis elegans WBGene00011750 I 0.865
CRE08691 Caenorhabditis remanei CRE08691 I 0.864
CBG15881 Caenorhabditis briggsae CBG15881 I 0.863
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.862
L898_g19019 Steinernema monticolum L898_g19019 I 0.862
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.860
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.842
L898_g12798 Steinernema monticolum L898_g12798 I 0.841
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.841
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.837
CRE05044 Caenorhabditis remanei CRE05044 I 0.833
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.832
L889_g6798 Steinernema feltiae L889_g6798 I 0.818
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.817
L889_g6799 Steinernema feltiae L889_g6799 I 0.814
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.812
L892_g10843 Steinernema scapterisci L892_g10843 I 0.811
L892_g2782 Steinernema scapterisci L892_g2782 I 0.810
L898_g20180 Steinernema monticolum L898_g20180 I 0.809
L889_g6696 Steinernema feltiae L889_g6696 I 0.803
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.801
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.796
Minc14668 Meloidogyne incognita Minc14668 I 0.796
L889_g6792 Steinernema feltiae L889_g6792 I 0.796
L889_g6797 Steinernema feltiae L889_g6797 I 0.794
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.791
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.788
CRE18699 Caenorhabditis remanei CRE18699 I 0.785
L892_g14818 Steinernema scapterisci L892_g14818 I 0.782
L893_g27930 Steinernema glaseri L893_g27930 I 0.781
L892_g14825 Steinernema scapterisci L892_g14825 I 0.778
L898_g4012 Steinernema monticolum L898_g4012 I 0.777
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.774
L892_g10842 Steinernema scapterisci L892_g10842 I 0.774
EVEC_0000956701 Enterobius vermicularis EVEC_0000956701 I 0.772
L889_g6804 Steinernema feltiae L889_g6804 I 0.772
L889_g8187 Steinernema feltiae L889_g8187 I 0.768
L898_g19021 Steinernema monticolum L898_g19021 I 0.763
CBN13569 Caenorhabditis brenneri CBN13569 I 0.758
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I 0.754
L898_g19014 Steinernema monticolum L898_g19014 I 0.752
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.750