nhr-204 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00019816 T306361_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-204
M00704_2.00		 Caenorhabditis elegans
NDNTGRTMHN
NDKAYCANHN		 PBM
Narasimhan et al.(2015)
pTH10028		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG26996_CONSTRUCT
M01300_2.00 		PBM CONSTRUCTS
NNNNTGRWMN
NKWYCANNNN		 PBM
Lambert et al.(2019)
pTH11460 		0.961 0.729
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00704_2.00 Nuclear receptor 49 121

DNA Binding Domains

Protein ID Domain From To Sequence
R02C2.4 Nuclear receptor 49 121

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN28056 Caenorhabditis brenneri CBN28056 I 0.973
CJA14829 Caenorhabditis japonica CJA14829 I 0.973
CBN23409 Caenorhabditis brenneri CBN23409 I 0.973
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.961
CBG26996 Caenorhabditis briggsae CBG26996 I 0.961
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.892
NECAME_08394 Necator americanus NECAME_08394 I 0.870
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.862
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.856
PPA21777 Pristionchus pacificus PPA21777 I 0.848
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.844
L889_g1557 Steinernema feltiae L889_g1557 I 0.834
L889_g1891 Steinernema feltiae L889_g1891 I 0.831
L898_g9866 Steinernema monticolum L898_g9866 I 0.829
L893_g28857 Steinernema glaseri L893_g28857 I 0.825
PPA29597 Pristionchus pacificus PPA29597 I 0.802
L893_g3565 Steinernema glaseri L893_g3565 I 0.801
L892_g17612 Steinernema scapterisci L892_g17612 I 0.800
CJA00680 Caenorhabditis japonica CJA00680 I 0.787
CBN24827 Caenorhabditis brenneri CBN24827 I 0.785
CRE00149 Caenorhabditis remanei CRE00149 I 0.784
CJA08896 Caenorhabditis japonica CJA08896 I 0.782
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.782
CBG10855 Caenorhabditis briggsae CBG10855 I 0.782
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.779
L892_g4169 Steinernema scapterisci L892_g4169 I 0.774
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.774
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.770
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.765
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.765
ASU_03657 Ascaris suum ASU_03657 I 0.760
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.760
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.758