CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nhr-273
(
Caenorhabditis elegans
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
WBGene00020460
T306367_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-86
M02415_2.00
Caenorhabditis elegans
KTGTAGTC
GACTACAM
PBM
Weirauch et al.(2014)
pTH8598
0.971
0.814
nhr-70
M00695_2.00
Caenorhabditis elegans
NYTGTAGYYD
HRRCTACARN
PBM
Narasimhan et al.(2015)
pTH9174
0.857
0.643
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T12C9.1
Nuclear receptor
11
80
SKCSICREPGDGFHFGAEACRACAAFFRRSVSQSKTYLCQGNNDCDVTVNIRCMCRACRYVKCIEVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis elegans
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy