nhr-239 (Caenorhabditis elegans)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 WBGene00021848 T306382_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in anatomical structure development; cell differentiation; and positive regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in head neurons and pharyngeal neurons. [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Hr83
M06434_2.00 		Drosophila melanogaster
RAAGTCANHVWVGM
KCBWBDNTGACTTY		 B1H
Zhu et al.(2011)
Hr83_SANGER_5_FBgn0037436 		0.765 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Y54F10AM.1 Nuclear receptor 9 79

Links

Other Nuclear receptor family TFs
Other Caenorhabditis elegans TFs

Invalid Input OrderBy

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action