XP_002647782.1 (Caenorhabditis briggsae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 XP_002647782.1 T306426_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
XP_002647782.1
M02420_2.00		 Caenorhabditis briggsae
NYGTAGYN
NRCTACRN		 PBM
Weirauch et al.(2014)
pTH5737		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.745 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02420_2.00 Nuclear receptor 1 73

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002647782.1 Nuclear receptor 4 76

Links

Other Nuclear receptor family TFs
Other Caenorhabditis briggsae TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE23397 Caenorhabditis remanei CRE23397 I 0.987
nhr-79 Caenorhabditis elegans WBGene00003669 I 0.985
CBN28846 Caenorhabditis brenneri CBN28846 I 0.979
CBN14151 Caenorhabditis brenneri CBN14151 I 0.899
nhr-256 Caenorhabditis elegans WBGene00022805 I 0.895
CJA15660 Caenorhabditis japonica CJA15660 I 0.893
CRE19042 Caenorhabditis remanei CRE19042 I 0.878
CBG06550 Caenorhabditis briggsae CBG06550 I 0.787
CBG20542 Caenorhabditis briggsae CBG20542 I 0.225