Afo_R002419 (Aptenodytes forsteri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Afo_R002419 T306483_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2F6
M02396_2.00 		Homo sapiens
NNRGGTCR
YGACCYNN		 PBM
Weirauch et al.(2014)
pTH6747 		0.135 1.000
Nr2f6
M00811_2.00 		Mus musculus
NRRGGTCANN
NNTGACCYYN		 PBM
Weirauch et al.(2013)
pTH2193 		0.135 1.000
NR2F6
M03386_2.00 		Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_1 		0.135 1.000
NR2F6
M03387_2.00 		Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
NR2F6_2 		0.135 1.000
NR2F6
M03388_2.00 		Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN		 SELEX
Jolma et al.(2013)
NR2F6_3 		0.135 1.000
Nr2f6
M03419_2.00 		Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY		 SELEX
Jolma et al.(2013)
Nr2f6_1 		0.135 1.000
Nr2f6
M03420_2.00 		Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY		 SELEX
Jolma et al.(2013)
Nr2f6_2 		0.135 1.000
NR2F6
M05641_2.00 		Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1 		0.135 1.000
NR2F6
M05642_2.00 		Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2 		0.135 1.000
NR2F6
M05645_2.00 		Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1 		0.135 1.000
NR2F6
M05646_2.00 		Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2 		0.135 1.000
NR2F6
M11153_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q2 		0.135 1.000
NR2F6
M11154_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EAR2_Q4 		0.135 1.000
NR2F6
M05643_2.00 		Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1 		0.135 1.000
NR2F6
M05644_2.00 		Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY		 SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2 		0.135 1.000
NR2F6
M05647_2.00 		Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1 		0.135 1.000
NR2F6
M05648_2.00 		Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN		 SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2 		0.135 1.000
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R002419 Nuclear receptor 1 31

Links

Other Nuclear receptor family TFs
Other Aptenodytes forsteri TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NR2F6 Sus scrofa ENSSSCG00000013873 I 0.135
ENSSTOG00000029231 Ictidomys tridecemlineatus ENSSTOG00000029231 I 0.135
NR2F6 Tupaia belangeri ENSTBEG00000016199 I 0.135
Nr2f6 Rattus norvegicus ENSRNOG00000016892 I 0.135
NR2F6 Pan troglodytes ENSPTRG00000010661 I 0.135
NR2F6 Oryzias latipes ENSORLG00000008911 I 0.135
ENSPPYG00000009703 Pongo abelii ENSPPYG00000009703 I 0.135
ENSPSIG00000013773 Pelodiscus sinensis ENSPSIG00000013773 I 0.135
NR2F6 Taeniopygia guttata ENSTGUG00000017126 I 0.135
NR2F6 Tursiops truncatus ENSTTRG00000003132 I 0.135
Pvit_09871 Pogona vitticeps Pvit_09871 I 0.135
nr2f6 Xenopus tropicalis XB-GENE-480818 I 0.135
nr2f6.L Xenopus laevis XB-GENE-480822 I 0.135
Ogr06168 Ophisaurus gracilis Ogr06168 I 0.135
ENSBTAP00000014791-D1 Bos grunniens ENSBTAP00000014791-D1 I 0.135
Alligator_sinensis_CCG003122.1 Alligator sinensis Alligator_sinensis_CCG003122.1 N 0.135
Cmyd_10015477 Chelonia mydas Cmyd_10015477 I 0.135
NR2F6 Otolemur garnettii ENSOGAG00000030281 I 0.135
ENSOARG00000017630 Ovis aries ENSOARG00000017630 I 0.135
NR2F6 Felis catus ENSFCAG00000000999 I 0.135
NR2F6 Homo sapiens ENSG00000160113 D 0.135
ENSGGOG00000023359 Gorilla gorilla ENSGGOG00000023359 I 0.135
ENSCSAG00000005651 Chlorocebus sabaeus ENSCSAG00000005651 I 0.135
NR2F6 Callithrix jacchus ENSCJAG00000009593 I 0.135
NR2F6 Bos taurus ENSBTAG00000011136 I 0.135
NR2F6 Canis familiaris ENSCAFG00000015487 I 0.135
NR2F6 Loxodonta africana ENSLAFG00000007367 I 0.135
ENSLOCG00000002897 Lepisosteus oculatus ENSLOCG00000002897 I 0.135
Nr2f6 Mus musculus ENSMUSG00000002393 D 0.135
ENSNLEG00000026754 Nomascus leucogenys ENSNLEG00000026754 I 0.135
NR2F6 Ornithorhynchus anatinus ENSOANG00000010421 N 0.135
ENSMPUG00000015918 Mustela putorius furo ENSMPUG00000015918 I 0.135
NR2F6 Monodelphis domestica ENSMODG00000015049 I 0.135
NR2F6 Myotis lucifugus ENSMLUG00000014386 I 0.135
NR2F6 Macaca mulatta ENSMMUG00000028849 I 0.135
ENSAMEG00000010370 Ailuropoda melanoleuca ENSAMEG00000010370 I 0.135