Afo_R009341 (Aptenodytes forsteri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Afo_R009341 T306493_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN

NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.794 0.786
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN

NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.794 0.786
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN

NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.794 0.786
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA

TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.794 0.786
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA

TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.794 0.786
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW

WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.794 0.786
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA

TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.794 0.786
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN

NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.794 0.786
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN

NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.794 0.786
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R009341 Nuclear receptor 13 68

Links

Other Nuclear receptor family TFs
Other Aptenodytes forsteri TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSMGAG00000014050 Meleagris gallopavo ENSMGAG00000014050 I 0.806
NR2E1 Ochotona princeps ENSOPRG00000012229 I 0.806
NR2E1 Microcebus murinus ENSMICG00000014274 I 0.806
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.797
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.797
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.794
NR2E1 Sorex araneus ENSSARG00000013555 I 0.794
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.794
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.794
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.794
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.794
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.794
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.794
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.794
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.794
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.794
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.794
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.794
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.794
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.794
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.794
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.794
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.794
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.794
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.794
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.794
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.794
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.794
Aan_R007044 Calypte anna Aan_R007044 I 0.794
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.794
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.794
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.794
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.794
NR2E1 Equus caballus ENSECAG00000018990 I 0.794
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.794
NR2E1 Felis catus ENSFCAG00000002255 I 0.794
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.794
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.794
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.794
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.794
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.794
NR2E1 Bos taurus ENSBTAG00000013991 I 0.794
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.794
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.794
NR2E1 Homo sapiens ENSG00000112333 D 0.794
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.794
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.794
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.794
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.794
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.794
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.794
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.794
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.794
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.794
NR2E1 Gallus gallus ENSGALG00000015305 I 0.794
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I 0.782
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I 0.782
nr2e1 Oryzias latipes ENSORLG00000013426 I 0.782
nr2e1 Takifugu rubripes ENSTRUG00000001893 I 0.782
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I 0.782
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I 0.782
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I 0.782
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I 0.782
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I 0.782
nr2e1 Danio rerio ENSDARG00000017107 I 0.780
Gfo_R016106 Geospiza fortis Gfo_R016106 I 0.776
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I 0.757
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I 0.747
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I 0.747