CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSP00000386747
(
Macaca fascicularis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ENSP00000386747
T306727_2.00
GigaDB (2015-Oct-22)
NCBI Gene Info:
This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. The encoded protein may act as a transcription factor. Mutations in this gene have been associated with disorders related to dopaminergic dysfunction, including Parkinson disease, schizophernia, and manic depression. Misregulation of this gene may be associated with rheumatoid arthritis. Alternatively spliced transcript variants have been described, but their biological validity has not been determined. [provided by RefSeq, Jul 2008]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nr4a2
M00818_2.00
Mus musculus
AAAGGTCA
TGACCTTT
PBM
Weirauch et al.(2013)
pTH3467
0.994
1.000
NR4A2
M03383_2.00
Homo sapiens
AGGTCAHNNNDTGACCT
AGGTCAHNNNDTGACCT
SELEX
Jolma et al.(2013)
NR4A2_1
0.994
1.000
NR4A2
M03384_2.00
Homo sapiens
TGACCTTTAAAGGTCA
TGACCTTTAAAGGTCA
SELEX
Jolma et al.(2013)
NR4A2_2
0.994
1.000
NR4A2
M03385_2.00
Homo sapiens
NBTAAAGGTCA
TGACCTTTAVN
SELEX
Jolma et al.(2013)
NR4A2_3
0.994
1.000
NR4A2
M05639_2.00
Homo sapiens
NWAAKGTCAN
NTGACMTTWN
SELEX
Yin et al.(2017)
NR4A2_eDBD_HT-SELEX
0.994
1.000
NR4A2
M05881_2.00
Homo sapiens
NAAAKGTYA
TRACMTTTN
SMiLE-seq
Isakova et al.(2017)
NR4A2
0.994
1.000
NR4A2
M09286_2.00
Homo sapiens
RAAGGTCAV
BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_HUMAN.H11MO.0.C
0.994
1.000
Nr4a2
M09323_2.00
Mus musculus
RAAGGTCAV
BTGACCTTY
Misc
Kulakovskiy et al.(2013)
NR4A2_MOUSE.H11MO.0.C
0.994
1.000
NR4A2
M11151_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3_01
0.994
1.000
NR4A2
M11152_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NURR1_Q3
0.994
1.000
NR4A2
M08461_2.00
Homo sapiens
RAGGTCAM
KTGACCTY
COMPILED
Mathelier et al.(2014)
MA0160.1
0.994
1.000
NR4A2
M05640_2.00
Homo sapiens
NAAAGGTCRN
NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A2_eDBD_Methyl-HT-SELEX
0.994
1.000
NR4A1
M05601_2.00
Homo sapiens
NAAAGGTCAN
NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1
0.986
0.929
NR4A1
M05602_2.00
Homo sapiens
NAAAGGTCAN
NTGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2
0.986
0.929
NR4A1
M08153_2.00
Homo sapiens
NAAAGGTCAN
NTGACCTTTN
ChIP-seq
Mathelier et al.(2014)
MA1112.1
0.986
0.929
NR4A1
M09274_2.00
Homo sapiens
AAAKGBCAN
NTGVCMTTT
Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A
0.986
0.929
NR4A1
M09608_2.00
Homo sapiens
NNDNAAAGGTCA
TGACCTTTNHNN
Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363
0.986
0.929
NR4A1
M11132_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_01
0.986
0.929
NR4A1
M11133_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5_02
0.986
0.929
NR4A1
M11134_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NUR77_Q5
0.986
0.929
NR4A1
M05603_2.00
Homo sapiens
NAAAGGTCRN
NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1
0.986
0.929
NR4A1
M05604_2.00
Homo sapiens
NAAAGGTCRN
NYGACCTTTN
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2
0.986
0.929
Nr4a1
M09317_2.00
Mus musculus
NRAADGKCA
TGMCHTTYN
Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B
0.986
0.914
Hr38
M03939_2.00
Drosophila melanogaster
NAAAGGTCA
TGACCTTTN
SELEX
Nitta et al.(2015)
Hr38_1
0.983
0.900
nhr-6
M01298_2.00
Caenorhabditis elegans
AAAKGTCA
TGACMTTT
PBM
Lambert et al.(2019)
pTH9944
0.955
0.757
Hr4
M06435_2.00
Drosophila melanogaster
AAGGTCA
TGACCTT
B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546
0.880
0.571
Q95WG3_ACRMI
M02424_2.00
Acropora millepora
NRAGGTCAN
NTGACCTYN
PBM
Weirauch et al.(2014)
pTH6144
0.864
0.643
usp
M03934_2.00
Drosophila melanogaster
ARRGGTCAAAGGTCA
TGACCTTTGACCYYT
SELEX
Nitta et al.(2015)
usp_1
0.862
0.643
usp
M06426_2.00
Drosophila melanogaster
HRRGGTCAH
DTGACCYYD
B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964
0.862
0.643
usp
M02709_2.00
Drosophila melanogaster
GGGGTCACSN
NSGTGACCCC
SELEX
Mathelier et al.(2014)
MA0016.1
0.862
0.643
usp
M09689_2.00
Drosophila melanogaster
KRGGTCACG
CGTGACCYM
Misc
Kulakovskiy et al.(2009)
usp
0.862
0.643
usp
M11191_2.00
Drosophila melanogaster
GRGGTCAYS
SRTGACCYC
Transfac
Matys et al.(2006)
I$CF1_01
0.862
0.643
usp
M11192_2.00
Drosophila melanogaster
GGGGTCAYS
SRTGACCCC
Transfac
Matys et al.(2006)
I$CF1_02
0.862
0.643
Rxrb
M02402_2.00
Mus musculus
VRGGTCAH
DTGACCYB
PBM
Weirauch et al.(2014)
pTH2861
0.861
0.657
RXRB
M03415_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRB_1
0.861
0.657
Rxrb
M03435_2.00
Mus musculus
GRGGTCAAAGGTCA
TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
Rxrb_1
0.861
0.657
RXRB
M05681_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1
0.861
0.657
RXRB
M05682_2.00
Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2
0.861
0.657
RXRB
M09297_2.00
Homo sapiens
DSAGGTCASD
HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C
0.861
0.657
Rxrb
M09330_2.00
Mus musculus
DSAGGTCASD
HSTGACCTSH
Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C
0.861
0.657
RXRB
M05683_2.00
Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1
0.861
0.657
RXRB
M05684_2.00
Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2
0.861
0.657
Rxra
M00181_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Badis et al.(2009)
Rxra_1035
0.858
0.643
RXRA
M03408_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_1
0.858
0.643
RXRA
M03409_2.00
Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_2
0.858
0.643
RXRA
M03410_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRA_3
0.858
0.643
RXRA
M03411_2.00
Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRA_4
0.858
0.643
Rxra
M03421_2.00
Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Rxra_1
0.858
0.643
Rxra
M03422_2.00
Mus musculus
RGGTCATGACCY
RGGTCATGACCY
SELEX
Jolma et al.(2013)
Rxra_2
0.858
0.643
RXRA
M05671_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX
0.858
0.643
RXRA
M05882_2.00
Homo sapiens
VRGKTBAAAGGTYRH
DYRACCTTTVAMCYB
SMiLE-seq
Isakova et al.(2017)
RXRa
0.858
0.643
RXRA
M07993_2.00
Homo sapiens
NRRGGTCA
TGACCYYN
ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha
0.858
0.643
RXRA
M07994_2.00
Homo sapiens
DDNNMRRGGTCANDN
NHNTGACCYYKNNHH
ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha
0.858
0.643
RXRA
M09294_2.00
Homo sapiens
VDDDNDNNVRRRGGKCAVDV
BHBTGMCCYYYBNNHNHHHB
Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A
0.858
0.643
Rxra
M09306_2.00
Mus musculus
DDVNNNNNRAGKTCAAGGYCA
TGRCCTTGAMCTYNNNNNBHH
Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A
0.858
0.643
RXRA
M11182_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RXRA_07
0.858
0.643
RXRA
M05672_2.00
Homo sapiens
RRGGTCAAAGGTCAH
DTGACCTTTGACCYY
SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX
0.858
0.643
Rxrg
M02400_2.00
Mus musculus
VRGGTCAN
NTGACCYB
PBM
Weirauch et al.(2014)
pTH2880
0.853
0.614
RXRG
M03375_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
RXRG_1
0.853
0.614
RXRG
M03376_2.00
Homo sapiens
RRGGTCATGACCYY
RRGGTCATGACCYY
SELEX
Jolma et al.(2013)
RXRG_2
0.853
0.614
RXRG
M03377_2.00
Homo sapiens
GRGGTCAAAGGTCA
TGACCTTTGACCYC
SELEX
Jolma et al.(2013)
RXRG_3
0.853
0.614
RXRG
M03378_2.00
Homo sapiens
NRGGTCATGACCYC
GRGGTCATGACCYN
SELEX
Jolma et al.(2013)
RXRG_4
0.853
0.614
RXRG
M02746_2.00
Homo sapiens
GGTCAAAGGTCA
TGACCTTTGACC
SELEX
Jolma et al.(2010)
RXRG_dimer
0.853
0.614
RXRG
M05615_2.00
Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1
0.853
0.614
RXRG
M05616_2.00
Homo sapiens
RRGGTCAYGACCYY
RRGGTCRTGACCYY
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2
0.853
0.614
RXRG
M05879_2.00
Homo sapiens
RGGTBAARGGTBRND
HNYVACCYTTVACCY
SMiLE-seq
Isakova et al.(2017)
RXRg
0.853
0.614
RXRG
M09280_2.00
Homo sapiens
NGTCAAAGGTCAH
DTGACCTTTGACN
Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B
0.853
0.614
Rxrg
M09305_2.00
Mus musculus
VDDVDNSVNRAGKTCAAGGYCA
TGRCCTTGAMCTYNBSNHBHHB
Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B
0.853
0.614
RXRG
M05617_2.00
Homo sapiens
DRGGTBAARGGTBRN
NYVACCYTTVACCYH
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1
0.853
0.614
RXRG
M05618_2.00
Homo sapiens
VRGGTCAYGACCYB
VRGGTCRTGACCYB
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2
0.853
0.614
Nr2f6
M00811_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH2193
0.848
0.557
Nr2f6
M03419_2.00
Mus musculus
RAGGTCAADAGGTCA
TGACCTHTTGACCTY
SELEX
Jolma et al.(2013)
Nr2f6_1
0.848
0.557
Nr2f6
M03420_2.00
Mus musculus
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
Nr2f6_2
0.848
0.557
Rora
M00819_2.00
Mus musculus
NNRGGTCA
TGACCYNN
PBM
Weirauch et al.(2013)
pTH3464
0.805
0.600
RORA
M03353_2.00
Homo sapiens
NMRAGGTCAAVYYVAGGTCA
TGACCTBRRBTTGACCTYKN
SELEX
Jolma et al.(2013)
RORA_1
0.805
0.600
RORA
M03354_2.00
Homo sapiens
WAWSTRGGTYASTAGGTCA
TGACCTASTRACCYASWTW
SELEX
Jolma et al.(2013)
RORA_2
0.805
0.600
RORA
M02705_2.00
Homo sapiens
WWVDAGGTCA
TGACCTHBWW
SELEX
Mathelier et al.(2014)
MA0071.1
0.805
0.600
RORA
M02706_2.00
Homo sapiens
NDWAWBTAGGTCAN
NTGACCTAVWTWHN
SELEX
Mathelier et al.(2014)
MA0072.1
0.805
0.600
RORA
M09265_2.00
Homo sapiens
VWNDRGGBCARDR
YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
0.805
0.600
Rora
M09327_2.00
Mus musculus
VWNDRGGBCARDR
YHYTGVCCYHNWB
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
0.805
0.600
RORA
M11090_2.00
Homo sapiens
DWWWVDAGGTCAH
DTGACCTHBWWWH
Transfac
Matys et al.(2006)
V$RORA1_01
0.805
0.600
RORA
M11091_2.00
Homo sapiens
DWAWBTAGGTCAN
NTGACCTAVWTWH
Transfac
Matys et al.(2006)
V$RORA2_01
0.805
0.600
RORA
M11092_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
0.805
0.600
RORA
M11093_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORA_Q4
0.805
0.600
Rorb
M00820_2.00
Mus musculus
NRGGTCANN
NNTGACCYN
PBM
Weirauch et al.(2013)
pTH3469
0.801
0.571
rorb
M02404_2.00
Tetraodon nigroviridis
NGAGGTCANN
NNTGACCTCN
PBM
Weirauch et al.(2014)
pTH6589
0.801
0.571
RORB
M05677_2.00
Homo sapiens
DAWNTRGGTYAGTRGGTCAN
NTGACCYACTRACCYANWTH
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
0.801
0.571
RORB
M05678_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
0.801
0.571
RORB
M05883_2.00
Homo sapiens
AWNBRGGTCAN
NTGACCYVNWT
SMiLE-seq
Isakova et al.(2017)
RORb
0.801
0.571
RORB
M11187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RORBETA_Q2
0.801
0.571
RORB
M05679_2.00
Homo sapiens
DAWBTRGGTYAGTRGGTCRN
NYGACCYACTRACCYAVWTH
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
0.801
0.571
RORB
M05680_2.00
Homo sapiens
NAWNKRGGTCAYGACCYMNWTN
NAWNKRGGTCRTGACCYMNWTN
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
0.801
0.571
AAEL009588
M02388_2.00
Aedes aegypti
NRGGTCR
YGACCYN
PBM
Weirauch et al.(2014)
pTH5508
0.798
0.571
Hr46
M02406_2.00
Drosophila melanogaster
NRGGTCAN
NTGACCYN
PBM
Weirauch et al.(2014)
pTH6142
0.798
0.571
Hr46
M03926_2.00
Drosophila melanogaster
RGGTCAGTRGGTCA
TGACCYACTGACCY
SELEX
Nitta et al.(2015)
Hr46_1
0.798
0.571
Hr46
M06412_2.00
Drosophila melanogaster
AWKTGGGTYW
WRACCCAMWT
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
0.798
0.571
Hr46
M06413_2.00
Drosophila melanogaster
HWNBAGGTCA
TGACCTVNWD
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
0.798
0.571
Nr2f2
M00184_2.00
Mus musculus
RRGGTCAN
NTGACCYY
PBM
Badis et al.(2009)
Nr2f2_2192
0.792
0.586
NR2F2
M08157_2.00
Homo sapiens
NNAAGGTCANN
NNTGACCTTNN
ChIP-seq
Mathelier et al.(2014)
MA1111.1
0.792
0.586
NR2F2
M08223_2.00
Homo sapiens
AAAGGTCA
TGACCTTT
ChIP-seq
Contrino et al.(2012)
Mv102
0.792
0.586
NR2F2
M08224_2.00
Homo sapiens
GGKCARAGGB
VCCTYTGMCC
ChIP-seq
Contrino et al.(2012)
Mv104
0.792
0.586
NR2F2
M09293_2.00
Homo sapiens
NARRGGTCADRDN
NHYHTGACCYYTN
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
0.792
0.586
Nr2f2
M09325_2.00
Mus musculus
NNHRAGGTCANVD
HBNTGACCTYDNN
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
0.792
0.586
NR2F2
M11180_2.00
Homo sapiens
WRRKKTCAARGGYTCA
TGARCCYTTGAMMYYW
Transfac
Matys et al.(2006)
V$ARP1_01
0.792
0.586
NR2F2
M11181_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
0.792
0.586
nr2f2
M02393_2.00
Danio rerio
NNRGGTCAN
NTGACCYNN
PBM
Weirauch et al.(2014)
pTH5882
0.789
0.586
Nr2f1
M00822_2.00
Mus musculus
DRGGTCRN
NYGACCYH
PBM
Weirauch et al.(2013)
pTH3811
0.789
0.586
NR2F1
M03403_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_1
0.789
0.586
NR2F1
M03404_2.00
Homo sapiens
RRGGTCAARAGGTCAN
NTGACCTYTTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_2
0.789
0.586
NR2F1
M03405_2.00
Homo sapiens
RRGGTCAN
NTGACCYY
SELEX
Jolma et al.(2013)
NR2F1_3
0.789
0.586
NR2F1
M03406_2.00
Homo sapiens
NHRRGGTCANVNG
CNBNTGACCYYDN
SELEX
Jolma et al.(2013)
NR2F1_4
0.789
0.586
NR2F1
M05661_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
0.789
0.586
NR2F1
M05662_2.00
Homo sapiens
VRGGTCANYGACCYY
RRGGTCRNTGACCYB
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
0.789
0.586
NR2F1
M05665_2.00
Homo sapiens
VRGGTCAAAGGTCAN
NTGACCTTTGACCYB
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
0.789
0.586
NR2F1
M05666_2.00
Homo sapiens
RRGGTCANYGACCYY
RRGGTCRNTGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
0.789
0.586
NR2F1
M09291_2.00
Homo sapiens
NRRRBSRRRGGKCANVN
NBNTGMCCYYYSVYYYN
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
0.789
0.586
Nr2f1
M09334_2.00
Mus musculus
YARAGGTCA
TGACCTYTR
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
0.789
0.586
NR2F1
M11172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
0.789
0.586
NR2F1
M05663_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
0.789
0.586
NR2F1
M05664_2.00
Homo sapiens
NRGGTCANYGACCYH
DRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
0.789
0.586
NR2F1
M05667_2.00
Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
0.789
0.586
NR2F1
M05668_2.00
Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
0.789
0.586
Nr2c1
M00812_2.00
Mus musculus
NRRGGTCANN
NNTGACCYYN
PBM
Weirauch et al.(2013)
pTH1284
0.786
0.586
Nr2c1
M02399_2.00
Mus musculus
RRGGTCAH
DTGACCYY
PBM
Weirauch et al.(2014)
pTH3466
0.786
0.586
NR2C1
M05597_2.00
Homo sapiens
NRGKKCRYGAMMYN
NRKKTCRYGMMCYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
0.786
0.586
NR2C1
M05598_2.00
Homo sapiens
NRRGGTCAN
NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
0.786
0.586
NR2C1
M09273_2.00
Homo sapiens
RBYVRVAGGTCAB
VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
0.786
0.586
Nr2c1
M09304_2.00
Mus musculus
RBYVRVAGGTCAB
VTGACCTBYBRVY
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
0.786
0.586
NR2C1
M05599_2.00
Homo sapiens
NRRGGTCAN
NTGACCYYN
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
0.786
0.586
NR2C1
M05600_2.00
Homo sapiens
RRGGTCRYGACCYY
RRGGTCRYGACCYY
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
0.786
0.586
RORC
M05621_2.00
Homo sapiens
KRGGTCAYGMCCYM
KRGGKCRTGACCYM
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
0.770
0.571
RORC
M05622_2.00
Homo sapiens
NAWNKRGGTYANTRGGTCAN
NTGACCYANTRACCYMNWTN
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
0.770
0.571
RORC
M05880_2.00
Homo sapiens
NDAWNTRGGKCA
TGMCCYANWTHN
SMiLE-seq
Isakova et al.(2017)
RORc
0.770
0.571
RORC
M09282_2.00
Homo sapiens
NDAWSTRRGTCA
TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
0.770
0.571
RORC
M05623_2.00
Homo sapiens
TRGGTCAYGACCYA
TRGGTCRTGACCYA
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
0.770
0.571
RORC
M05624_2.00
Homo sapiens
NAWNTRGGTYASTAGGTCAN
NTGACCTASTRACCYANWTN
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
0.770
0.571
Rorc
M09324_2.00
Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
0.768
0.571
Rorc
M09617_2.00
Mus musculus
AWBTRGGTCA
TGACCYAVWT
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
0.768
0.571
NR2F6
M02396_2.00
Homo sapiens
NNRGGTCR
YGACCYNN
PBM
Weirauch et al.(2014)
pTH6747
0.767
0.543
NR2F6
M03386_2.00
Homo sapiens
RRGGTCAAAAGGTCA
TGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_1
0.767
0.543
NR2F6
M03387_2.00
Homo sapiens
RRGGTCAAAGGTCA
TGACCTTTGACCYY
SELEX
Jolma et al.(2013)
NR2F6_2
0.767
0.543
NR2F6
M03388_2.00
Homo sapiens
NRGGTCAAAGGTCA
TGACCTTTGACCYN
SELEX
Jolma et al.(2013)
NR2F6_3
0.767
0.543
NR2F6
M05641_2.00
Homo sapiens
RRGGTCAAAGGTCAN
NTGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
0.767
0.543
NR2F6
M05642_2.00
Homo sapiens
RAGGTCANTGACCTY
RAGGTCANTGACCTY
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
0.767
0.543
NR2F6
M05645_2.00
Homo sapiens
NRGGTCARAGGTCRN
NYGACCTYTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
0.767
0.543
NR2F6
M05646_2.00
Homo sapiens
NRGGTCANYGACCYY
RRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
0.767
0.543
NR2F6
M11153_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q2
0.767
0.543
NR2F6
M11154_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EAR2_Q4
0.767
0.543
NR2F6
M05643_2.00
Homo sapiens
RRGGTCAAAGGTCRN
NYGACCTTTGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
0.767
0.543
NR2F6
M05644_2.00
Homo sapiens
RRGGTCRNYGACCYY
RRGGTCRNYGACCYY
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
0.767
0.543
NR2F6
M05647_2.00
Homo sapiens
NRGGTYADRGGKBRN
NYVMCCYHTRACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
0.767
0.543
NR2F6
M05648_2.00
Homo sapiens
NRGGTCANYGACCYN
NRGGTCRNTGACCYN
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
0.767
0.543
RARG
M02397_2.00
Homo sapiens
VGGTCANN
NNTGACCB
PBM
Weirauch et al.(2014)
pTH5430
0.754
0.586
Rarg
M00810_2.00
Mus musculus
NNVGKTCANN
NNTGAMCBNN
PBM
Weirauch et al.(2013)
pTH4269
0.754
0.586
RARG
M03391_2.00
Homo sapiens
SRGGTCAAAAGGTCAVD
HBTGACCTTTTGACCYS
SELEX
Jolma et al.(2013)
RARG_1
0.754
0.586
RARG
M03392_2.00
Homo sapiens
RAGGTCAHVHWRAGGTCA
TGACCTYWDBDTGACCTY
SELEX
Jolma et al.(2013)
RARG_2
0.754
0.586
RARG
M03393_2.00
Homo sapiens
RRGGTCAHNNRAGGTCA
TGACCTYNNDTGACCYY
SELEX
Jolma et al.(2013)
RARG_3
0.754
0.586
RARG
M03394_2.00
Homo sapiens
GAGGTCAAAAGGTCAY
RTGACCTTTTGACCTC
SELEX
Jolma et al.(2013)
RARG_4
0.754
0.586
RARG
M03395_2.00
Homo sapiens
RAGGTCAABYARRGKTCA
TGAMCYYTRVTTGACCTY
SELEX
Jolma et al.(2013)
RARG_5
0.754
0.586
RARG
M03396_2.00
Homo sapiens
RAGGTCAHBNVRGGTCA
TGACCYBNVDTGACCTY
SELEX
Jolma et al.(2013)
RARG_6
0.754
0.586
Rarg
M03416_2.00
Mus musculus
RRGGTCAAAAGGTCAH
DTGACCTTTTGACCYY
SELEX
Jolma et al.(2013)
Rarg_1
0.754
0.586
Rarg
M03417_2.00
Mus musculus
RAGGTCAWVHAAAGGTCA
TGACCTTTDBWTGACCTY
SELEX
Jolma et al.(2013)
Rarg_2
0.754
0.586
Rarg
M03418_2.00
Mus musculus
AAGGTCAHSARAGGTCA
TGACCTYTSDTGACCTT
SELEX
Jolma et al.(2013)
Rarg_3
0.754
0.586
RARG
M05653_2.00
Homo sapiens
NRGGTCANV
BNTGACCYN
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
0.754
0.586
RARG
M05649_2.00
Homo sapiens
DRGGTCAAAAGKTCAN
NTGAMCTTTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
0.754
0.586
RARG
M05650_2.00
Homo sapiens
RAGGTCATGACCTH
DAGGTCATGACCTY
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
0.754
0.586
Rarg
M05885_2.00
Mus musculus
NRGGTCANDRGKKYA
TRMMCYHNTGACCYN
SMiLE-seq
Isakova et al.(2017)
RARg
0.754
0.586
RARG
M09289_2.00
Homo sapiens
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
0.754
0.586
Rarg
M09300_2.00
Mus musculus
RGGTCAVVVWGNMMNNDV
BHNNKKNCWBBBTGACCY
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
0.754
0.586
Rarg
M09613_2.00
Mus musculus
RGKTCAAGGBCA
TGVCCTTGAMCY
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
0.754
0.586
RARG
M11167_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RARG_Q3
0.754
0.586
RARG
M05654_2.00
Homo sapiens
NRGGTCRNV
BNYGACCYN
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
0.754
0.586
RARG
M05651_2.00
Homo sapiens
DRGGTCAARRGGTCRN
NYGACCYYTTGACCYH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
0.754
0.586
RARG
M05652_2.00
Homo sapiens
DAGKTCRYGACCYY
RRGGTCRYGAMCTH
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
0.754
0.586
sex-1
M02416_2.00
Caenorhabditis elegans
RAGGTCAH
DTGACCTY
PBM
Weirauch et al.(2014)
pTH5667
0.751
0.557
svp
M06423_2.00
Drosophila melanogaster
ARGGTCA
TGACCYK
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
0.750
0.543
Smp_105090
M02412_2.00
Schistosoma mansoni
RGGTCANN
NNTGACCY
PBM
Weirauch et al.(2014)
pTH6174
0.749
0.614
PPARD
M05581_2.00
Homo sapiens
NRRGGTCAAAGGTCAN
NTGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_1
0.748
0.543
PPARD
M05582_2.00
Homo sapiens
HRRGGTCAYGACCYYD
HRRGGTCRTGACCYYD
SELEX
Yin et al.(2017)
PPARD_eDBD_HT-SELEX_2
0.748
0.543
PPARD
M05583_2.00
Homo sapiens
NRRGGTCAAAGGTCRN
NYGACCTTTGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_1
0.748
0.543
PPARD
M05584_2.00
Homo sapiens
NRRGGTCRCGACCYYN
NRRGGTCGYGACCYYN
SELEX
Yin et al.(2017)
PPARD_eDBD_Methyl-HT-SELEX_2
0.748
0.543
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000386747
Nuclear receptor
261
330
GLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVK
Links
Other
Nuclear receptor
family TFs
Other
Macaca fascicularis
TFs
1502 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy