|
ENSP00000405330-D1
(Bos grunniens)
Nuclear receptor
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00105 (zf-C4) |
IPR001628 |
ENSP00000405330-D1 |
T306729_2.00 |
GigaDB (2015-Oct-22) |
NCBI Gene Info:This gene encodes an estrogen receptor and ligand-activated transcription factor. The canonical protein contains an N-terminal ligand-independent transactivation domain, a central DNA binding domain, a hinge domain, and a C-terminal ligand-dependent transactivation domain. The protein localizes to the nucleus where it may form either a homodimer or a heterodimer with estrogen receptor 2. The protein encoded by this gene regulates the transcription of many estrogen-inducible genes that play a role in growth, metabolism, sexual development, gestation, and other reproductive functions and is expressed in many non-reproductive tissues. The receptor encoded by this gene plays a key role in breast cancer, endometrial cancer, and osteoporosis. This gene is reported to have dozens of transcript variants due to the use of alternate promoters and alternative splicing, however, the full-length nature of many of these variants remain uncertain. [provided by RefSeq, Jul 2020] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
Esr1
M00813_2.00 |
Mus musculus |
NRKGTCANNN |
NNNTGACMYN |
PBM
Weirauch et al.(2013)
pTH3510
|
0.990
|
1.000
|
ESR1
M03356_2.00 |
Homo sapiens |
NRGGTCAMVRTGACCTK |
MAGGTCAYBKTGACCYN |
SELEX
Jolma et al.(2013)
ESR1_1
|
0.990
|
1.000
|
ESR1
M05569_2.00 |
Homo sapiens |
NAGGTCAYSRTGACCTN |
NAGGTCAYSRTGACCTN |
SELEX
Yin et al.(2017)
ESR1_eDBD_HT-SELEX
|
0.990
|
1.000
|
ESR1
M05571_2.00 |
Homo sapiens |
NRGGTCANSNTGACCYN |
NRGGTCANSNTGACCYN |
SELEX
Yin et al.(2017)
ESR1_FL_HT-SELEX
|
0.990
|
1.000
|
ESR1
M07985_2.00 |
Homo sapiens |
DNBYMAAGGTCANN |
NNTGACCTTKRVNH |
ChIP-seq
Gerstein et al.(2012)
HepG2_ERRA_Stanford
|
0.990
|
1.000
|
ESR1
M08217_2.00 |
Homo sapiens |
NHNRGGTCANNNTGNCCY |
RGGNCANNNTGACCYNDN |
ChIP-seq
Contrino et al.(2012)
Mv66
|
0.990
|
1.000
|
ESR1
M08218_2.00 |
Homo sapiens |
CCAAGGTCAS |
STGACCTTGG |
ChIP-seq
Contrino et al.(2012)
Mv67
|
0.990
|
1.000
|
ESR1
M09267_2.00 |
Homo sapiens |
RGGKCABMNTGMCCY |
RGGKCANKVTGMCCY |
Misc
Kulakovskiy et al.(2013)
ESR1_HUMAN.H11MO.0.A
|
0.990
|
1.000
|
Esr1
M09309_2.00 |
Mus musculus |
RGGDCABKSTGWCCY |
RGGWCASMVTGHCCY |
Misc
Kulakovskiy et al.(2013)
ESR1_MOUSE.H11MO.0.A
|
0.990
|
1.000
|
ESR1
M09604_2.00 |
Homo sapiens |
NRGGTCANNNTGACC |
GGTCANNNTGACCYN |
Misc
Heinz et al.(2010)
MCF7-ERa_Unpublished
|
0.990
|
1.000
|
ESR1
M11098_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERALPHA_01
|
0.990
|
1.000
|
ESR1
M11099_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERALPHA_Q4
|
0.990
|
1.000
|
ESR1
M11100_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_01
|
0.990
|
1.000
|
ESR1
M11101_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERALPHA_Q6_02
|
0.990
|
1.000
|
ESR1
M11102_2.00 |
Homo sapiens |
NHRGGTCAVNNHNNHYBNN |
NNVRDNNDNNBTGACCYDN |
Transfac
Matys et al.(2006)
V$ER_Q6
|
0.990
|
1.000
|
ESR1
M11103_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ESR1_04
|
0.990
|
1.000
|
ESR1
M11104_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ESR1_05
|
0.990
|
1.000
|
ESR1
M05570_2.00 |
Homo sapiens |
NAGGTCAYSRYGACCTH |
DAGGTCRYSRTGACCTN |
SELEX
Yin et al.(2017)
ESR1_eDBD_Methyl-HT-SELEX
|
0.990
|
1.000
|
ESR1
M05572_2.00 |
Homo sapiens |
NRGGTCANSBYGACCYN |
NRGGTCRVSNTGACCYN |
SELEX
Yin et al.(2017)
ESR1_FL_Methyl-HT-SELEX
|
0.990
|
1.000
|
Esr2
M01297_2.00 |
Mus musculus |
NNRGGTCAH |
DTGACCYNN |
PBM
Lambert et al.(2019)
pTH3511
|
0.989
|
0.929
|
ESR2
M08154_2.00 |
Homo sapiens |
RGGTCASNNWGNCCY |
RGGNCWNNSTGACCY |
ChIP-seq
Mathelier et al.(2014)
MA0258.2
|
0.989
|
0.929
|
ESR2
M09279_2.00 |
Homo sapiens |
RGGKCRVRSYGMCCY |
RGGKCRSYBYGMCCY |
Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A
|
0.989
|
0.929
|
Esr2
M09311_2.00 |
Mus musculus |
RGGKCRVRSYGMCCY |
RGGKCRSYBYGMCCY |
Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A
|
0.989
|
0.929
|
ESR2
M11146_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERBETA_Q5_01
|
0.989
|
0.929
|
ESR2
M11147_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERBETA_Q5
|
0.989
|
0.929
|
Q6VU64_APLCA
M02423_2.00 |
Aplysia californica |
NRGGTCAN |
NTGACCYN |
PBM
Weirauch et al.(2014)
pTH6055
|
0.949
|
0.814
|
ERR
M03941_2.00 |
Drosophila melanogaster |
BSAAGGTCRH |
DYGACCTTSV |
SELEX
Nitta et al.(2015)
ERR_1
|
0.844
|
0.657
|
ERR
M06433_2.00 |
Drosophila melanogaster |
MAAGGTCA |
TGACCTTK |
B1H
Zhu et al.(2011)
ERR_SANGER_5_FBgn0035849
|
0.844
|
0.657
|
Esrrg
M00817_2.00 |
Mus musculus |
VAAGGTCA |
TGACCTTB |
PBM
Weirauch et al.(2013)
pTH3841
|
0.844
|
0.714
|
ESRRB
M03367_2.00 |
Homo sapiens |
TCAAGGTCAWH |
DWTGACCTTGA |
SELEX
Jolma et al.(2013)
ESRRB_1
|
0.844
|
0.714
|
ESRRG
M03412_2.00 |
Homo sapiens |
AAGGTCAHNYSAAGGTCA |
TGACCTTSRNDTGACCTT |
SELEX
Jolma et al.(2013)
ESRRG_1
|
0.844
|
0.714
|
ESRRG
M03413_2.00 |
Homo sapiens |
AAGGTCANHCAAGGTCA |
TGACCTTGDNTGACCTT |
SELEX
Jolma et al.(2013)
ESRRG_2
|
0.844
|
0.714
|
ESRRG
M03414_2.00 |
Homo sapiens |
YSAAGGTCAH |
DTGACCTTSR |
SELEX
Jolma et al.(2013)
ESRRG_3
|
0.844
|
0.714
|
ESRRB
M05595_2.00 |
Homo sapiens |
BBSAAGGTCRH |
DYGACCTTSVV |
SELEX
Yin et al.(2017)
ESRRB_eDBD_HT-SELEX
|
0.844
|
0.714
|
ESRRG
M05673_2.00 |
Homo sapiens |
NNSAAGGTCRN |
NYGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRG_eDBD_HT-SELEX
|
0.844
|
0.714
|
ESRRG
M05675_2.00 |
Homo sapiens |
NNSAAGGTCRN |
NYGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRG_FL_HT-SELEX
|
0.844
|
0.714
|
Esrrb
M08034_2.00 |
Mus musculus |
NNBYCAAGGTCANNB |
VNNTGACCTTGRVNN |
ChIP-seq
Chen et al.(2011)
SRP000217_Esrrb
|
0.844
|
0.714
|
ESRRB
M09272_2.00 |
Homo sapiens |
BCAAGGTCA |
TGACCTTGV |
Misc
Kulakovskiy et al.(2013)
ERR2_HUMAN.H11MO.0.A
|
0.844
|
0.714
|
ESRRG
M09296_2.00 |
Homo sapiens |
TCAAGGTCA |
TGACCTTGA |
Misc
Kulakovskiy et al.(2013)
ERR3_HUMAN.H11MO.0.B
|
0.844
|
0.714
|
Esrrb
M09312_2.00 |
Mus musculus |
NHDBTCAAGGTCANNBN |
NVNNTGACCTTGAVHDN |
Misc
Kulakovskiy et al.(2013)
ERR2_MOUSE.H11MO.0.A
|
0.844
|
0.714
|
Esrrg
M09321_2.00 |
Mus musculus |
BSAAGGWCAB |
VTGWCCTTSV |
Misc
Kulakovskiy et al.(2013)
ERR3_MOUSE.H11MO.0.C
|
0.844
|
0.714
|
ESRRB
M11129_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR2_01
|
0.844
|
0.714
|
ESRRB
M11130_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR2_Q2
|
0.844
|
0.714
|
ESRRB
M11131_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR2_Q3
|
0.844
|
0.714
|
ESRRG
M11185_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR3_Q2_01
|
0.844
|
0.714
|
ESRRG
M11186_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR3_Q2
|
0.844
|
0.714
|
ESRRB
M05596_2.00 |
Homo sapiens |
NNSAAGGTCRH |
DYGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRB_eDBD_Methyl-HT-SELEX
|
0.844
|
0.714
|
ESRRG
M05674_2.00 |
Homo sapiens |
NNSAAGGTCRN |
NYGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRG_eDBD_Methyl-HT-SELEX
|
0.844
|
0.714
|
ESRRG
M05676_2.00 |
Homo sapiens |
NNSAAGGTCRN |
NYGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRG_FL_Methyl-HT-SELEX
|
0.844
|
0.714
|
Esrra
M00183_2.00 |
Mus musculus |
VAAGGTCAH |
DTGACCTTB |
PBM
Badis et al.(2009)
Esrra_2190
|
0.828
|
0.686
|
ESRRA
M03397_2.00 |
Homo sapiens |
NYSAAGGTCAH |
DTGACCTTSRN |
SELEX
Jolma et al.(2013)
ESRRA_1
|
0.828
|
0.686
|
ESRRA
M03398_2.00 |
Homo sapiens |
AAGGTCAWHCAAGGTCA |
TGACCTTGDWTGACCTT |
SELEX
Jolma et al.(2013)
ESRRA_2
|
0.828
|
0.686
|
ESRRA
M03399_2.00 |
Homo sapiens |
SAAGGTCAHNYSAAGGTCA |
TGACCTTSRNDTGACCTTS |
SELEX
Jolma et al.(2013)
ESRRA_3
|
0.828
|
0.686
|
ESRRA
M03400_2.00 |
Homo sapiens |
NYSAAGGTCAH |
DTGACCTTSRN |
SELEX
Jolma et al.(2013)
ESRRA_4
|
0.828
|
0.686
|
ESRRA
M03401_2.00 |
Homo sapiens |
RAGGTCABNCAAGGTCA |
TGACCTTGNVTGACCTY |
SELEX
Jolma et al.(2013)
ESRRA_5
|
0.828
|
0.686
|
ESRRA
M03402_2.00 |
Homo sapiens |
VAAGGTCAHNYSAAGGTCA |
TGACCTTSRNDTGACCTTB |
SELEX
Jolma et al.(2013)
ESRRA_6
|
0.828
|
0.686
|
Esrra
M03430_2.00 |
Mus musculus |
DAGGTYAKTMAAGGTCA |
TGACCTTKAMTRACCTH |
SELEX
Jolma et al.(2013)
Esrra_1
|
0.828
|
0.686
|
Esrra
M03431_2.00 |
Mus musculus |
KTCAAGGTCAT |
ATGACCTTGAM |
SELEX
Jolma et al.(2013)
Esrra_2
|
0.828
|
0.686
|
ESRRA
M05655_2.00 |
Homo sapiens |
NNSAAGGTCAN |
NTGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRA_eDBD_HT-SELEX
|
0.828
|
0.686
|
ESRRA
M05657_2.00 |
Homo sapiens |
NNSAAGGTCAH |
DTGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRA_FL_HT-SELEX
|
0.828
|
0.686
|
ESRRA
M07988_2.00 |
Homo sapiens |
RGGKCASMNTGMCCY |
RGGKCANKSTGMCCY |
ChIP-seq
Gerstein et al.(2012)
ECC-1_ERALPHA_HudsonAlpha
|
0.828
|
0.686
|
ESRRA
M07989_2.00 |
Homo sapiens |
NNRGGTCABNNTGHCCYNN |
NNRGGDCANNVTGACCYNN |
ChIP-seq
Gerstein et al.(2012)
T-47D_ERALPHA_HudsonAlpha
|
0.828
|
0.686
|
ESRRA
M09290_2.00 |
Homo sapiens |
BYSAAGGTCANNNNN |
NNNNNTGACCTTSRV |
Misc
Kulakovskiy et al.(2013)
ERR1_HUMAN.H11MO.0.A
|
0.828
|
0.686
|
Esrra
M09319_2.00 |
Mus musculus |
NNBYCAAGGTCA |
TGACCTTGRVNN |
Misc
Kulakovskiy et al.(2013)
ERR1_MOUSE.H11MO.0.A
|
0.828
|
0.686
|
ESRRA
M11168_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR1_Q2_01
|
0.828
|
0.686
|
ESRRA
M11169_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR1_Q2
|
0.828
|
0.686
|
ESRRA
M11170_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ERR1_Q3
|
0.828
|
0.686
|
ESRRA
M11171_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$ESRRA_10
|
0.828
|
0.686
|
ESRRA
M05656_2.00 |
Homo sapiens |
NNSAAGGTCRN |
NYGACCTTSNN |
SELEX
Yin et al.(2017)
ESRRA_eDBD_Methyl-HT-SELEX
|
0.828
|
0.686
|
ESRRA
M05658_2.00 |
Homo sapiens |
NBSAAGGTCRH |
DYGACCTTSVN |
SELEX
Yin et al.(2017)
ESRRA_FL_Methyl-HT-SELEX
|
0.828
|
0.686
|
Nr2f2
M00184_2.00 |
Mus musculus |
RRGGTCAN |
NTGACCYY |
PBM
Badis et al.(2009)
Nr2f2_2192
|
0.821
|
0.514
|
NR2F2
M08157_2.00 |
Homo sapiens |
NNAAGGTCANN |
NNTGACCTTNN |
ChIP-seq
Mathelier et al.(2014)
MA1111.1
|
0.821
|
0.514
|
NR2F2
M08223_2.00 |
Homo sapiens |
AAAGGTCA |
TGACCTTT |
ChIP-seq
Contrino et al.(2012)
Mv102
|
0.821
|
0.514
|
NR2F2
M08224_2.00 |
Homo sapiens |
GGKCARAGGB |
VCCTYTGMCC |
ChIP-seq
Contrino et al.(2012)
Mv104
|
0.821
|
0.514
|
NR2F2
M09293_2.00 |
Homo sapiens |
NARRGGTCADRDN |
NHYHTGACCYYTN |
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
|
0.821
|
0.514
|
Nr2f2
M09325_2.00 |
Mus musculus |
NNHRAGGTCANVD |
HBNTGACCTYDNN |
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
|
0.821
|
0.514
|
NR2F2
M11180_2.00 |
Homo sapiens |
WRRKKTCAARGGYTCA |
TGARCCYTTGAMMYYW |
Transfac
Matys et al.(2006)
V$ARP1_01
|
0.821
|
0.514
|
NR2F2
M11181_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
|
0.821
|
0.514
|
nr2f2
M02393_2.00 |
Danio rerio |
NNRGGTCAN |
NTGACCYNN |
PBM
Weirauch et al.(2014)
pTH5882
|
0.818
|
0.514
|
Nr2f1
M00822_2.00 |
Mus musculus |
DRGGTCRN |
NYGACCYH |
PBM
Weirauch et al.(2013)
pTH3811
|
0.818
|
0.514
|
NR2F1
M03403_2.00 |
Homo sapiens |
RRGGTCAAAGGTCAN |
NTGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
NR2F1_1
|
0.818
|
0.514
|
NR2F1
M03404_2.00 |
Homo sapiens |
RRGGTCAARAGGTCAN |
NTGACCTYTTGACCYY |
SELEX
Jolma et al.(2013)
NR2F1_2
|
0.818
|
0.514
|
NR2F1
M03405_2.00 |
Homo sapiens |
RRGGTCAN |
NTGACCYY |
SELEX
Jolma et al.(2013)
NR2F1_3
|
0.818
|
0.514
|
NR2F1
M03406_2.00 |
Homo sapiens |
NHRRGGTCANVNG |
CNBNTGACCYYDN |
SELEX
Jolma et al.(2013)
NR2F1_4
|
0.818
|
0.514
|
NR2F1
M05661_2.00 |
Homo sapiens |
NRGGTCAAAGGTCRN |
NYGACCTTTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
|
0.818
|
0.514
|
NR2F1
M05662_2.00 |
Homo sapiens |
VRGGTCANYGACCYY |
RRGGTCRNTGACCYB |
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
|
0.818
|
0.514
|
NR2F1
M05665_2.00 |
Homo sapiens |
VRGGTCAAAGGTCAN |
NTGACCTTTGACCYB |
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
|
0.818
|
0.514
|
NR2F1
M05666_2.00 |
Homo sapiens |
RRGGTCANYGACCYY |
RRGGTCRNTGACCYY |
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
|
0.818
|
0.514
|
NR2F1
M09291_2.00 |
Homo sapiens |
NRRRBSRRRGGKCANVN |
NBNTGMCCYYYSVYYYN |
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
|
0.818
|
0.514
|
Nr2f1
M09334_2.00 |
Mus musculus |
YARAGGTCA |
TGACCTYTR |
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
|
0.818
|
0.514
|
NR2F1
M11172_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
|
0.818
|
0.514
|
NR2F1
M05663_2.00 |
Homo sapiens |
NRGGTCAAAGGTCRN |
NYGACCTTTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
|
0.818
|
0.514
|
NR2F1
M05664_2.00 |
Homo sapiens |
NRGGTCANYGACCYH |
DRGGTCRNTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
|
0.818
|
0.514
|
NR2F1
M05667_2.00 |
Homo sapiens |
NRGGTCAAAGGTCRN |
NYGACCTTTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
|
0.818
|
0.514
|
NR2F1
M05668_2.00 |
Homo sapiens |
RRGGTCRNYGACCYY |
RRGGTCRNYGACCYY |
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
|
0.818
|
0.514
|
sex-1
M02416_2.00 |
Caenorhabditis elegans |
RAGGTCAH |
DTGACCTY |
PBM
Weirauch et al.(2014)
pTH5667
|
0.801
|
0.557
|
NR2F6
M02396_2.00 |
Homo sapiens |
NNRGGTCR |
YGACCYNN |
PBM
Weirauch et al.(2014)
pTH6747
|
0.801
|
0.543
|
NR2F6
M03386_2.00 |
Homo sapiens |
RRGGTCAAAAGGTCA |
TGACCTTTTGACCYY |
SELEX
Jolma et al.(2013)
NR2F6_1
|
0.801
|
0.543
|
NR2F6
M03387_2.00 |
Homo sapiens |
RRGGTCAAAGGTCA |
TGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
NR2F6_2
|
0.801
|
0.543
|
NR2F6
M03388_2.00 |
Homo sapiens |
NRGGTCAAAGGTCA |
TGACCTTTGACCYN |
SELEX
Jolma et al.(2013)
NR2F6_3
|
0.801
|
0.543
|
NR2F6
M05641_2.00 |
Homo sapiens |
RRGGTCAAAGGTCAN |
NTGACCTTTGACCYY |
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_1
|
0.801
|
0.543
|
NR2F6
M05642_2.00 |
Homo sapiens |
RAGGTCANTGACCTY |
RAGGTCANTGACCTY |
SELEX
Yin et al.(2017)
NR2F6_eDBD_HT-SELEX_2
|
0.801
|
0.543
|
NR2F6
M05645_2.00 |
Homo sapiens |
NRGGTCARAGGTCRN |
NYGACCTYTGACCYN |
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_1
|
0.801
|
0.543
|
NR2F6
M05646_2.00 |
Homo sapiens |
NRGGTCANYGACCYY |
RRGGTCRNTGACCYN |
SELEX
Yin et al.(2017)
NR2F6_FL_HT-SELEX_2
|
0.801
|
0.543
|
NR2F6
M11153_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$EAR2_Q2
|
0.801
|
0.543
|
NR2F6
M11154_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$EAR2_Q4
|
0.801
|
0.543
|
NR2F6
M05643_2.00 |
Homo sapiens |
RRGGTCAAAGGTCRN |
NYGACCTTTGACCYY |
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_1
|
0.801
|
0.543
|
NR2F6
M05644_2.00 |
Homo sapiens |
RRGGTCRNYGACCYY |
RRGGTCRNYGACCYY |
SELEX
Yin et al.(2017)
NR2F6_eDBD_Methyl-HT-SELEX_2
|
0.801
|
0.543
|
NR2F6
M05647_2.00 |
Homo sapiens |
NRGGTYADRGGKBRN |
NYVMCCYHTRACCYN |
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_1
|
0.801
|
0.543
|
NR2F6
M05648_2.00 |
Homo sapiens |
NRGGTCANYGACCYN |
NRGGTCRNTGACCYN |
SELEX
Yin et al.(2017)
NR2F6_FL_Methyl-HT-SELEX_2
|
0.801
|
0.543
|
CBG17178
M02392_2.00 |
Caenorhabditis briggsae |
RAGGTCAH |
DTGACCTY |
PBM
Weirauch et al.(2014)
pTH6634
|
0.800
|
0.557
|
Q969A9_BOMMO
M02410_2.00 |
Bombyx mori |
VRGGTCDN |
NHGACCYB |
PBM
Weirauch et al.(2014)
pTH5516
|
0.800
|
0.500
|
RARG
M02397_2.00 |
Homo sapiens |
VGGTCANN |
NNTGACCB |
PBM
Weirauch et al.(2014)
pTH5430
|
0.795
|
0.600
|
Rarg
M00810_2.00 |
Mus musculus |
NNVGKTCANN |
NNTGAMCBNN |
PBM
Weirauch et al.(2013)
pTH4269
|
0.795
|
0.600
|
RARG
M03391_2.00 |
Homo sapiens |
SRGGTCAAAAGGTCAVD |
HBTGACCTTTTGACCYS |
SELEX
Jolma et al.(2013)
RARG_1
|
0.795
|
0.600
|
RARG
M03392_2.00 |
Homo sapiens |
RAGGTCAHVHWRAGGTCA |
TGACCTYWDBDTGACCTY |
SELEX
Jolma et al.(2013)
RARG_2
|
0.795
|
0.600
|
RARG
M03393_2.00 |
Homo sapiens |
RRGGTCAHNNRAGGTCA |
TGACCTYNNDTGACCYY |
SELEX
Jolma et al.(2013)
RARG_3
|
0.795
|
0.600
|
RARG
M03394_2.00 |
Homo sapiens |
GAGGTCAAAAGGTCAY |
RTGACCTTTTGACCTC |
SELEX
Jolma et al.(2013)
RARG_4
|
0.795
|
0.600
|
RARG
M03395_2.00 |
Homo sapiens |
RAGGTCAABYARRGKTCA |
TGAMCYYTRVTTGACCTY |
SELEX
Jolma et al.(2013)
RARG_5
|
0.795
|
0.600
|
RARG
M03396_2.00 |
Homo sapiens |
RAGGTCAHBNVRGGTCA |
TGACCYBNVDTGACCTY |
SELEX
Jolma et al.(2013)
RARG_6
|
0.795
|
0.600
|
Rarg
M03416_2.00 |
Mus musculus |
RRGGTCAAAAGGTCAH |
DTGACCTTTTGACCYY |
SELEX
Jolma et al.(2013)
Rarg_1
|
0.795
|
0.600
|
Rarg
M03417_2.00 |
Mus musculus |
RAGGTCAWVHAAAGGTCA |
TGACCTTTDBWTGACCTY |
SELEX
Jolma et al.(2013)
Rarg_2
|
0.795
|
0.600
|
Rarg
M03418_2.00 |
Mus musculus |
AAGGTCAHSARAGGTCA |
TGACCTYTSDTGACCTT |
SELEX
Jolma et al.(2013)
Rarg_3
|
0.795
|
0.600
|
RARG
M05653_2.00 |
Homo sapiens |
NRGGTCANV |
BNTGACCYN |
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
|
0.795
|
0.600
|
RARG
M05649_2.00 |
Homo sapiens |
DRGGTCAAAAGKTCAN |
NTGAMCTTTTGACCYH |
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
|
0.795
|
0.600
|
RARG
M05650_2.00 |
Homo sapiens |
RAGGTCATGACCTH |
DAGGTCATGACCTY |
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
|
0.795
|
0.600
|
Rarg
M05885_2.00 |
Mus musculus |
NRGGTCANDRGKKYA |
TRMMCYHNTGACCYN |
SMiLE-seq
Isakova et al.(2017)
RARg
|
0.795
|
0.600
|
RARG
M09289_2.00 |
Homo sapiens |
RGGTCAVVVWGNMMNNDV |
BHNNKKNCWBBBTGACCY |
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
|
0.795
|
0.600
|
Rarg
M09300_2.00 |
Mus musculus |
RGGTCAVVVWGNMMNNDV |
BHNNKKNCWBBBTGACCY |
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
|
0.795
|
0.600
|
Rarg
M09613_2.00 |
Mus musculus |
RGKTCAAGGBCA |
TGVCCTTGAMCY |
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
|
0.795
|
0.600
|
RARG
M11167_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RARG_Q3
|
0.795
|
0.600
|
RARG
M05654_2.00 |
Homo sapiens |
NRGGTCRNV |
BNYGACCYN |
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
|
0.795
|
0.600
|
RARG
M05651_2.00 |
Homo sapiens |
DRGGTCAARRGGTCRN |
NYGACCYYTTGACCYH |
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
|
0.795
|
0.600
|
RARG
M05652_2.00 |
Homo sapiens |
DAGKTCRYGACCYY |
RRGGTCRYGAMCTH |
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
|
0.795
|
0.600
|
Rorb
M00820_2.00 |
Mus musculus |
NRGGTCANN |
NNTGACCYN |
PBM
Weirauch et al.(2013)
pTH3469
|
0.793
|
0.500
|
rorb
M02404_2.00 |
Tetraodon nigroviridis |
NGAGGTCANN |
NNTGACCTCN |
PBM
Weirauch et al.(2014)
pTH6589
|
0.793
|
0.500
|
RORB
M05677_2.00 |
Homo sapiens |
DAWNTRGGTYAGTRGGTCAN |
NTGACCYACTRACCYANWTH |
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
|
0.793
|
0.500
|
RORB
M05678_2.00 |
Homo sapiens |
NAWNKRGGTCAYGACCYMNWTN |
NAWNKRGGTCRTGACCYMNWTN |
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
|
0.793
|
0.500
|
RORB
M05883_2.00 |
Homo sapiens |
AWNBRGGTCAN |
NTGACCYVNWT |
SMiLE-seq
Isakova et al.(2017)
RORb
|
0.793
|
0.500
|
RORB
M11187_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RORBETA_Q2
|
0.793
|
0.500
|
RORB
M05679_2.00 |
Homo sapiens |
DAWBTRGGTYAGTRGGTCRN |
NYGACCYACTRACCYAVWTH |
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
|
0.793
|
0.500
|
RORB
M05680_2.00 |
Homo sapiens |
NAWNKRGGTCAYGACCYMNWTN |
NAWNKRGGTCRTGACCYMNWTN |
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
|
0.793
|
0.500
|
NR2C2
M03407_2.00 |
Homo sapiens |
VRGGTCAAAGGTCA |
TGACCTTTGACCYB |
SELEX
Jolma et al.(2013)
NR2C2_1
|
0.791
|
0.543
|
NR2C2
M05669_2.00 |
Homo sapiens |
NRGGTCRN |
NYGACCYN |
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
|
0.791
|
0.543
|
NR2C2
M08156_2.00 |
Homo sapiens |
NVRGGTCARAGGKCA |
TGMCCTYTGACCYBN |
ChIP-seq
Mathelier et al.(2014)
MA0504.1
|
0.791
|
0.543
|
NR2C2
M07990_2.00 |
Homo sapiens |
WBYRCTTCCGGGKYV |
BRMCCCGGAAGYRVW |
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
|
0.791
|
0.543
|
NR2C2
M07991_2.00 |
Homo sapiens |
DWBYRCTTCCGGGKY |
RMCCCGGAAGYRVWH |
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
|
0.791
|
0.543
|
NR2C2
M07992_2.00 |
Homo sapiens |
WBYRCTTCCGGGKYR |
YRMCCCGGAAGYRVW |
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
|
0.791
|
0.543
|
NR2C2
M08221_2.00 |
Homo sapiens |
DWBYDCTTCCGGGKY |
RMCCCGGAAGHRVWH |
ChIP-seq
Contrino et al.(2012)
Mv97
|
0.791
|
0.543
|
NR2C2
M08222_2.00 |
Homo sapiens |
TCARAGGTCA |
TGACCTYTGA |
ChIP-seq
Contrino et al.(2012)
Mv98
|
0.791
|
0.543
|
NR2C2
M09292_2.00 |
Homo sapiens |
RBTYMVRGGTCR |
YGACCYBKRAVY |
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
|
0.791
|
0.543
|
Nr2c2
M09303_2.00 |
Mus musculus |
RRGKSARAGGKCA |
TGMCCTYTSMCYY |
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
|
0.791
|
0.543
|
NR2C2
M09611_2.00 |
Homo sapiens |
RRGGTCARAGGTCA |
TGACCTYTGACCYY |
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
|
0.791
|
0.543
|
NR2C2
M11173_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NR2C2_03
|
0.791
|
0.543
|
NR2C2
M11174_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NR2C2_04
|
0.791
|
0.543
|
NR2C2
M11175_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_01
|
0.791
|
0.543
|
NR2C2
M11176_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_03
|
0.791
|
0.543
|
NR2C2
M11177_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_Q2_01
|
0.791
|
0.543
|
NR2C2
M11178_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_Q2
|
0.791
|
0.543
|
NR2C2
M11179_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_Q3
|
0.791
|
0.543
|
NR2C2
M05670_2.00 |
Homo sapiens |
NRGGTCRN |
NYGACCYN |
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
|
0.791
|
0.543
|
Rora
M00819_2.00 |
Mus musculus |
NNRGGTCA |
TGACCYNN |
PBM
Weirauch et al.(2013)
pTH3464
|
0.790
|
0.514
|
RORA
M03353_2.00 |
Homo sapiens |
NMRAGGTCAAVYYVAGGTCA |
TGACCTBRRBTTGACCTYKN |
SELEX
Jolma et al.(2013)
RORA_1
|
0.790
|
0.514
|
RORA
M03354_2.00 |
Homo sapiens |
WAWSTRGGTYASTAGGTCA |
TGACCTASTRACCYASWTW |
SELEX
Jolma et al.(2013)
RORA_2
|
0.790
|
0.514
|
RORA
M02705_2.00 |
Homo sapiens |
WWVDAGGTCA |
TGACCTHBWW |
SELEX
Mathelier et al.(2014)
MA0071.1
|
0.790
|
0.514
|
RORA
M02706_2.00 |
Homo sapiens |
NDWAWBTAGGTCAN |
NTGACCTAVWTWHN |
SELEX
Mathelier et al.(2014)
MA0072.1
|
0.790
|
0.514
|
RORA
M09265_2.00 |
Homo sapiens |
VWNDRGGBCARDR |
YHYTGVCCYHNWB |
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
|
0.790
|
0.514
|
Rora
M09327_2.00 |
Mus musculus |
VWNDRGGBCARDR |
YHYTGVCCYHNWB |
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
|
0.790
|
0.514
|
RORA
M11090_2.00 |
Homo sapiens |
DWWWVDAGGTCAH |
DTGACCTHBWWWH |
Transfac
Matys et al.(2006)
V$RORA1_01
|
0.790
|
0.514
|
RORA
M11091_2.00 |
Homo sapiens |
DWAWBTAGGTCAN |
NTGACCTAVWTWH |
Transfac
Matys et al.(2006)
V$RORA2_01
|
0.790
|
0.514
|
RORA
M11092_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
|
0.790
|
0.514
|
RORA
M11093_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RORA_Q4
|
0.790
|
0.514
|
svp
M06423_2.00 |
Drosophila melanogaster |
ARGGTCA |
TGACCYK |
B1H
Zhu et al.(2011)
svp_SANGER_5_FBgn0003651
|
0.783
|
0.486
|
Rorc
M09324_2.00 |
Mus musculus |
NDAWSTRRGTCA |
TGACYYASWTHN |
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
|
0.779
|
0.486
|
Rorc
M09617_2.00 |
Mus musculus |
AWBTRGGTCA |
TGACCYAVWT |
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
|
0.779
|
0.486
|
Eip75B
M03928_2.00 |
Drosophila melanogaster |
MWVTAGGTCANN |
NNTGACCTABWK |
SELEX
Nitta et al.(2015)
Eip75B_1
|
0.776
|
0.557
|
Eip75B
M03929_2.00 |
Drosophila melanogaster |
AWNTRGGTCANTRGGTCA |
TGACCYANTGACCYANWT |
SELEX
Nitta et al.(2015)
Eip75B_2
|
0.776
|
0.557
|
Eip75B
M06416_2.00 |
Drosophila melanogaster |
KWWNTRGGTCA |
TGACCYANWWM |
B1H
Zhu et al.(2011)
Eip75B_SANGER_5_FBgn0000568
|
0.776
|
0.557
|
Smp_105090
M02412_2.00 |
Schistosoma mansoni |
RGGTCANN |
NNTGACCY |
PBM
Weirauch et al.(2014)
pTH6174
|
0.775
|
0.571
|
Nr1h2
M09620_2.00 |
Mus musculus |
RGGTYACTNNAGGTCA |
TGACCTNNAGTRACCY |
Misc
Heinz et al.(2010)
RAW-LXRb.biotin_GSE21512
|
0.775
|
0.514
|
O77476_BRUPA
M02422_2.00 |
Brugia pahangi |
NRGGTCAN |
NTGACCYN |
PBM
Weirauch et al.(2014)
pTH6019
|
0.774
|
0.543
|
NR1H3
M09264_2.00 |
Homo sapiens |
NHRRGGBHABHNNRGGNCA |
TGNCCYNNDVTDVCCYYDN |
Misc
Kulakovskiy et al.(2013)
NR1H3_HUMAN.H11MO.0.B
|
0.771
|
0.500
|
Nr1h3
M09301_2.00 |
Mus musculus |
VDGDNCARAGKBCAN |
NTGVMCTYTGNHCHB |
Misc
Kulakovskiy et al.(2013)
NR1H3_MOUSE.H11MO.0.A
|
0.768
|
0.500
|
Eip78C
M06427_2.00 |
Drosophila melanogaster |
RGGTCA |
TGACCY |
B1H
Zhu et al.(2011)
Eip78C_SANGER_5_FBgn0004865
|
0.760
|
0.514
|
RORC
M05621_2.00 |
Homo sapiens |
KRGGTCAYGMCCYM |
KRGGKCRTGACCYM |
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
|
0.760
|
0.471
|
RORC
M05622_2.00 |
Homo sapiens |
NAWNKRGGTYANTRGGTCAN |
NTGACCYANTRACCYMNWTN |
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
|
0.760
|
0.471
|
RORC
M05880_2.00 |
Homo sapiens |
NDAWNTRGGKCA |
TGMCCYANWTHN |
SMiLE-seq
Isakova et al.(2017)
RORc
|
0.760
|
0.471
|
RORC
M09282_2.00 |
Homo sapiens |
NDAWSTRRGTCA |
TGACYYASWTHN |
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
|
0.760
|
0.471
|
RORC
M05623_2.00 |
Homo sapiens |
TRGGTCAYGACCYA |
TRGGTCRTGACCYA |
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
|
0.760
|
0.471
|
RORC
M05624_2.00 |
Homo sapiens |
NAWNTRGGTYASTAGGTCAN |
NTGACCTASTRACCYANWTN |
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
|
0.760
|
0.471
|
Hr78
M06430_2.00 |
Drosophila melanogaster |
HVAGGTCA |
TGACCTBD |
B1H
Zhu et al.(2011)
Hr78_SANGER_5_FBgn0015239
|
0.760
|
0.514
|
Rarb
M02401_2.00 |
Mus musculus |
NRRGGTCAHN |
NDTGACCYYN |
PBM
Weirauch et al.(2014)
pTH2804
|
0.757
|
0.571
|
RARA
M03369_2.00 |
Homo sapiens |
RRAGGTCAWBWRRGGTCA |
TGACCYYWVWTGACCTYY |
SELEX
Jolma et al.(2013)
RARA_1
|
0.757
|
0.571
|
RARA
M03370_2.00 |
Homo sapiens |
RAGGTCAAAAGGTCAWKB |
VMWTGACCTTTTGACCTY |
SELEX
Jolma et al.(2013)
RARA_2
|
0.757
|
0.571
|
RARA
M03371_2.00 |
Homo sapiens |
AGGTCAHNYWRAGGTCA |
TGACCTYWRNDTGACCT |
SELEX
Jolma et al.(2013)
RARA_3
|
0.757
|
0.571
|
RARA
M03372_2.00 |
Homo sapiens |
ARGGTCAAAAGGTCA |
TGACCTTTTGACCYT |
SELEX
Jolma et al.(2013)
RARA_4
|
0.757
|
0.571
|
RARA
M03373_2.00 |
Homo sapiens |
WRRGGTCAHSHRRGGTCA |
TGACCYYDSDTGACCYYW |
SELEX
Jolma et al.(2013)
RARA_5
|
0.757
|
0.571
|
RARA
M03374_2.00 |
Homo sapiens |
AGGTCAWNNARAGGTCA |
TGACCTYTNNWTGACCT |
SELEX
Jolma et al.(2013)
RARA_6
|
0.757
|
0.571
|
RARB
M03355_2.00 |
Homo sapiens |
AAAGGTCAARAGGTCA |
TGACCTYTTGACCTTT |
SELEX
Jolma et al.(2013)
RARB_1
|
0.757
|
0.571
|
Rarb
M03423_2.00 |
Mus musculus |
WAAGGTCAAAAGGTCA |
TGACCTTTTGACCTTW |
SELEX
Jolma et al.(2013)
Rarb_1
|
0.757
|
0.571
|
Rarb
M03424_2.00 |
Mus musculus |
RRAGGTCANBWRAGGTCA |
TGACCTYWVNTGACCTYY |
SELEX
Jolma et al.(2013)
Rarb_2
|
0.757
|
0.571
|
Rarb
M03425_2.00 |
Mus musculus |
AGGTCAHVBWRAGGTCA |
TGACCTYWVBDTGACCT |
SELEX
Jolma et al.(2013)
Rarb_3
|
0.757
|
0.571
|
RARA
M05607_2.00 |
Homo sapiens |
NVGGKCANNRGGKCAN |
NTGMCCYNNTGMCCBN |
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_1
|
0.757
|
0.571
|
RARA
M05608_2.00 |
Homo sapiens |
NVGGKCAYGNCCBN |
NVGGNCRTGMCCBN |
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_2
|
0.757
|
0.571
|
RARA
M05609_2.00 |
Homo sapiens |
NRRGGTCANV |
BNTGACCYYN |
SELEX
Yin et al.(2017)
RARA_eDBD_HT-SELEX_3
|
0.757
|
0.571
|
RARB
M05563_2.00 |
Homo sapiens |
NHAAGGTCAN |
NTGACCTTDN |
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_1
|
0.757
|
0.571
|
RARB
M05564_2.00 |
Homo sapiens |
RRGGTCAARRGGTCAN |
NTGACCYYTTGACCYY |
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_2
|
0.757
|
0.571
|
RARB
M05565_2.00 |
Homo sapiens |
DAGGTCAYGACCYY |
RRGGTCRTGACCTH |
SELEX
Yin et al.(2017)
RARB_FL_HT-SELEX_3
|
0.757
|
0.571
|
RARA
M05878_2.00 |
Homo sapiens |
RAGGTCA |
TGACCTY |
SMiLE-seq
Isakova et al.(2017)
RARa
|
0.757
|
0.571
|
RARA
M09277_2.00 |
Homo sapiens |
RRRDVDBSNDRAGKTCARGG |
CCYTGAMCTYHNSVHBHYYY |
Misc
Kulakovskiy et al.(2013)
RARA_HUMAN.H11MO.0.A
|
0.757
|
0.571
|
RARA
M11137_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NR1B1_Q6
|
0.757
|
0.571
|
RARB
M11094_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NR1B2_Q6
|
0.757
|
0.571
|
RARA
M05610_2.00 |
Homo sapiens |
DRGGKCRNDRGGTCRN |
NYGACCYHNYGMCCYH |
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_1
|
0.757
|
0.571
|
RARA
M05611_2.00 |
Homo sapiens |
NVGGTCAYGMCCYN |
NRGGKCRTGACCBN |
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_2
|
0.757
|
0.571
|
RARA
M05612_2.00 |
Homo sapiens |
NRAGGTCANN |
NNTGACCTYN |
SELEX
Yin et al.(2017)
RARA_eDBD_Methyl-HT-SELEX_3
|
0.757
|
0.571
|
RARB
M05566_2.00 |
Homo sapiens |
NHRAGGTCAH |
DTGACCTYDN |
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_1
|
0.757
|
0.571
|
RARB
M05567_2.00 |
Homo sapiens |
RRGGTCAHRRGGTCAN |
NTGACCYYDTGACCYY |
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_2
|
0.757
|
0.571
|
RARB
M05568_2.00 |
Homo sapiens |
RRGGTCAYGACCYY |
RRGGTCRTGACCYY |
SELEX
Yin et al.(2017)
RARB_FL_Methyl-HT-SELEX_3
|
0.757
|
0.571
|
Rara
M00185_2.00 |
Mus musculus |
NRGGTCAN |
NTGACCYN |
PBM
Badis et al.(2009)
Rara_1051
|
0.757
|
0.557
|
Rara
M03432_2.00 |
Mus musculus |
AAAGGTCAHBVRAGGTCA |
TGACCTYBVDTGACCTTT |
SELEX
Jolma et al.(2013)
Rara_1
|
0.757
|
0.557
|
Rara
M03433_2.00 |
Mus musculus |
AGGTCAHNHAAAGGTCA |
TGACCTTTDNDTGACCT |
SELEX
Jolma et al.(2013)
Rara_2
|
0.757
|
0.557
|
Rara
M03434_2.00 |
Mus musculus |
RAGGTCAAAAGGTCA |
TGACCTTTTGACCTY |
SELEX
Jolma et al.(2013)
Rara_3
|
0.757
|
0.557
|
Rara
M09329_2.00 |
Mus musculus |
RGRTCRDRAGKTCAAGGTCA |
TGACCTTGAMCTYHYGAYCY |
Misc
Kulakovskiy et al.(2013)
RARA_MOUSE.H11MO.0.A
|
0.757
|
0.557
|
For this family, TFs with SR scores > 0.745 will likely have a similar motif |