CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr13888
(
Ophisaurus gracilis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Ogr13888
T306859_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr13888
Nuclear receptor
67
136
RTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNR
Ogr13888
Nuclear receptor
620
689
ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQNCKIDKTQRKRCPYCRFQKCLVVGMRL
Links
Other
Nuclear receptor
family TFs
Other
Ophisaurus gracilis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000005494
Astyanax mexicanus
ENSAMXG00000005494
N
0.981
fgenesh2_pg.scaffold_292000021
Branchiostoma floridae
fgenesh2_pg.scaffold_292000021
N
0.920
Alligator_sinensis_CCG016206.1
Alligator sinensis
Alligator_sinensis_CCG016206.1
N
0.909
fgenesh2_pg.scaffold_333000035
Branchiostoma floridae
fgenesh2_pg.scaffold_333000035
N
0.851
CGI_10011713
Crassostrea gigas
CGI_10011713
N
0.829