Pvit_09406 (Pogona vitticeps)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Pvit_09406 T306890_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ENSGALG00000028624
M02398_2.00
Gallus gallus
GRGKTCAH

DTGAMCYC
PBM
Weirauch et al.(2014)
pTH6492
0.968 0.829
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA

TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.915 0.643
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA

TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.915 0.643
VDR
M05877_2.00
Homo sapiens
HRRGTTCA

TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.915 0.643
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.915 0.643
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.915 0.643
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN

NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.915 0.643
VDR
M11116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.915 0.643
VDR
M11117_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.915 0.643
VDR
M11118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.915 0.643
Nr1i3
M09302_2.00
Mus musculus
DRGGTCANNNRAGTTYAN

NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_MOUSE.H11MO.0.C
0.911 0.700
NR1I2
M03925_2.00
Homo sapiens
RGKKCRNNVRGKKCR

YGMMCYBNNYGMMCY
SELEX
Nitta et al.(2015)
NR1I2_1
0.900 0.643
NR1I2
M05625_2.00
Homo sapiens
VRGTTCRNNSRGKTCRH

DYGAMCYSNNYGAACYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_HT-SELEX
0.900 0.643
NR1I2
M09283_2.00
Homo sapiens
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_HUMAN.H11MO.0.C
0.900 0.643
NR1I2
M05626_2.00
Homo sapiens
VRGKKCRNNVRGKKCRN

NYGMMCYBNNYGMMCYB
SELEX
Yin et al.(2017)
NR1I2_eDBD_Methyl-HT-SELEX
0.900 0.643
ENSPMAG00000000180
M02403_2.00
Petromyzon marinus
RGKWCRN

NYGWMCY
PBM
Weirauch et al.(2014)
pTH5509
0.890 0.643
THRB
M03379_2.00
Homo sapiens
DTGACCTBATVAGGTCAN

NTGACCTBATVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_1
0.825 0.543
THRB
M03380_2.00
Homo sapiens
DTGACCTBANTRAGGTCAH

DTGACCTYANTVAGGTCAH
SELEX
Jolma et al.(2013)
THRB_2
0.825 0.543
THRB
M03381_2.00
Homo sapiens
NTGWCCTYADNTRAGGTCAH

DTGACCTYANHTRAGGWCAN
SELEX
Jolma et al.(2013)
THRB_3
0.825 0.543
THRB
M05629_2.00
Homo sapiens
NRGGTCAAAGGTCRN

NYGACCTTTGACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1
0.825 0.543
THRB
M05630_2.00
Homo sapiens
NRRGGTCAYGACCYYN

NRRGGTCRTGACCYYN
SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2
0.825 0.543
THRB
M05633_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1
0.825 0.543
THRB
M05634_2.00
Homo sapiens
TRAGGTCABVYVAGGTCAH

DTGACCTBRBVTGACCTYA
SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2
0.825 0.543
THRB
M09285_2.00
Homo sapiens
VRVSYVABVKSAGGWCA

TGWCCTSMBVTBRSBYB
Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C
0.825 0.543
THRB
M11150_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01
0.825 0.543
THRB
M05631_2.00
Homo sapiens
NRGGTYRDRGGKYRN

NYRMCCYHYRACCYN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1
0.825 0.543
THRB
M05632_2.00
Homo sapiens
NNRGGTCAYGACCYBN

NVRGGTCRTGACCYNN
SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2
0.825 0.543
THRB
M05635_2.00
Homo sapiens
NTGWCCTBRNYVAGGWCAN

NTGWCCTBRNYVAGGWCAN
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1
0.825 0.543
THRB
M05636_2.00
Homo sapiens
YRAGGWCAYGYRAGGWCAH

DTGWCCTYRCRTGWCCTYR
SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2
0.825 0.543
THRA
M03368_2.00
Homo sapiens
DTGACCTYATVAGGTCAH

DTGACCTBATRAGGTCAH
SELEX
Jolma et al.(2013)
THRA_1
0.823 0.557
THRA
M09275_2.00
Homo sapiens
RGKWSDNNYVAGGWSAN

NTSWCCTBRNNHSWMCY
Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C
0.823 0.557
Thra
M09333_2.00
Mus musculus
VRGGKCANNYVRGGHCA

TGDCCYBRNNTGMCCYB
Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C
0.823 0.557
Thra
M09619_2.00
Mus musculus
GGKCANNYVRGGHCA

TGDCCYBRNNTGMCC
Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347
0.823 0.557
THRA
M11135_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$T3RALPHA_Q6
0.823 0.557
GAG_AVIER
M11193_2.00
Avian erythroblastosis virus
VHNTRAGGTCACSSNN

NNSSGTGACCTYANDB
Transfac
Matys et al.(2006)
V$T3R_01
0.821 0.529
NR1I3
M03924_2.00
Homo sapiens
RGKDYRNNNNRGKKYR

YRMMCYNNNNYRHMCY
SELEX
Nitta et al.(2015)
NR1I3_1
0.814 0.671
NR1I3
M05619_2.00
Homo sapiens
WDAGTTCAH

DTGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_HT-SELEX
0.814 0.671
NR1I3
M09281_2.00
Homo sapiens
DRGGTCANNNRAGTTYAN

NTRAACTYNNNTGACCYH
Misc
Kulakovskiy et al.(2013)
NR1I3_HUMAN.H11MO.0.C
0.814 0.671
NR1I3
M05620_2.00
Homo sapiens
WDAGTTCRN

NYGAACTHW
SELEX
Yin et al.(2017)
NR1I3_FL_Methyl-HT-SELEX
0.814 0.671
Nr1i2
M09316_2.00
Mus musculus
DDRRBTYMDNNRAGKTCAN

NTGAMCTYNNHKRAVYYHH
Misc
Kulakovskiy et al.(2013)
NR1I2_MOUSE.H11MO.0.C
0.794 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_09406 Nuclear receptor 84 153

Links

Other Nuclear receptor family TFs
Other Pogona vitticeps TFs

323 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g03640 Acanthocheilonema viteae nAv.1.0.1.g03640 N 0.000
AAEL003558 Aedes aegypti AAEL003558 N 0.000
ANCCAN_02501 Ancylostoma caninum ANCCAN_02501 N 0.000
ANCCEY_04498 Ancylostoma ceylanicum ANCCEY_04498 N 0.000
ANCDUO_01800 Ancylostoma duodenale ANCDUO_01800 N 0.000
ASIM_0001023101 Anisakis simplex ASIM_0001023101 N 0.000
AARA001118 Anopheles arabiensis AARA001118 N 0.000
ACHR008953 Anopheles christyi ACHR008953 N 0.000
ACOM027781 Anopheles coluzzii ACOM027781 N 0.000
AMAM012119 Anopheles maculatus AMAM012119 N 0.000
AMEC001472 Anopheles melas AMEC001472 N 0.000
AMEM006409 Anopheles merus AMEM006409 N 0.000
AQUA008305 Anopheles quadriannulatus AQUA008305 N 0.000
ALUE_0000523001 Ascaris lumbricoides ALUE_0000523001 N 0.000
BGLB003107 Biomphalaria glabrata BGLB003107 N 0.000
Bm12962 Brugia malayi Bm12962 N 0.000
BTMF_0000819101 Brugia timori BTMF_0000819101 N 0.000
BXY_0681200 Bursaphelenchus xylophilus BXY_0681200 N 0.000
CBN28537 Caenorhabditis brenneri CBN28537 N 0.000
CBN28364 Caenorhabditis brenneri CBN28364 N 0.000
CBG25174 Caenorhabditis briggsae CBG25174 N 0.000
CJA40030 Caenorhabditis japonica CJA40030 N 0.000
CJA30884 Caenorhabditis japonica CJA30884 N 0.000
CapteG215623 Capitella teleta CapteG215623 N 0.000
CGI_10012805 Crassostrea gigas CGI_10012805 N 0.000
CpipJ_CPIJ006385 Culex pipiens CpipJ_CPIJ006385 N 0.000
CpipJ_CPIJ018552 Culex pipiens CpipJ_CPIJ018552 N 0.000
CPIJ006385 Culex quinquefasciatus CPIJ006385 N 0.000
CPIJ018552 Culex quinquefasciatus CPIJ018552 N 0.000
CGOC_0000560601 Cylicostephanus goldi CGOC_0000560601 N 0.000
DICVIV_09521 Dictyocaulus viviparus DICVIV_09521 N 0.000
nDi.2.2.2.g01975 Dirofilaria immitis nDi.2.2.2.g01975 N 0.000
GM26798 Drosophila sechellia FBgn0181651 N 0.000
EEL_0000436501 Elaeophora elaphi EEL_0000436501 N 0.000
HPLM_0001120601 Haemonchus placei HPLM_0001120601 N 0.000
HPBE_0001925501 Heligmosomoides bakeri HPBE_0001925501 N 0.000
HelroG184094 Helobdella robusta HelroG184094 N 0.000
Hba_16068 Heterorhabditis bacteriophora Hba_16068 N 0.000
nLs.2.1.2.g02280 Litomosoides sigmodontis nLs.2.1.2.g02280 N 0.000
LOAG_18302 Loa loa LOAG_18302 N 0.000
LCUP009926 Lucilia cuprina LCUP009926 N 0.000
MESCA003372 Megaselia scalaris MESCA003372 N 0.000
augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00776-processed-gene-0.0 N 0.000
MDOA007303 Musca domestica MDOA007303 N 0.000
OFLC_0001322801 Onchocerca flexuosa OFLC_0001322801 N 0.000
nOo.2.0.1.g07994 Onchocerca ochengi nOo.2.0.1.g07994 N 0.000
nOo.2.0.1.g06917 Onchocerca ochengi nOo.2.0.1.g06917 N 0.000
WBGene00237282 Onchocerca volvulus WBGene00237282 N 0.000
PEQ_0000886501 Parascaris equorum PEQ_0000886501 N 0.000
scaffold58-EXSNAP2012.11 Pristionchus exspectatus scaffold58-EXSNAP2012.11 N 0.000
PPA09748 Pristionchus pacificus PPA09748 N 0.000
RPRC014602 Rhodnius prolixus RPRC014602 N 0.000
L893_g14196 Steinernema glaseri L893_g14196 N 0.000
L898_g11712 Steinernema monticolum L898_g11712 N 0.000
SVE_1689300 Strongyloides venezuelensis SVE_1689300 N 0.000
TELCIR_13776 Teladorsagia circumcincta TELCIR_13776 N 0.000
TCLT_0000816701 Thelazia callipaeda TCLT_0000816701 N 0.000
TCNE_0000027001 Toxocara canis TCNE_0000027001 N 0.000
EFV52452 Trichinella spiralis EFV52452 N 0.000
D918_05751 Trichuris suis D918_05751 N 0.000
TTRE_0000249801 Trichuris trichiura TTRE_0000249801 N 0.000
WUBG_04923 Wuchereria bancrofti WUBG_04923 N 0.000