|
HHAL006554-PA
(Halyomorpha halys)
Nuclear receptor
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00105 (zf-C4) |
IPR001628 |
HHAL006554-PA |
T307106_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
ftz-f1
M02407_2.00 |
Drosophila melanogaster |
RRGGTCAH |
DTGACCYY |
PBM
Weirauch et al.(2014)
pTH5709
|
0.990
|
0.971
|
ftz-f1
M06417_2.00 |
Drosophila melanogaster |
MMRKYYSAAGGWCRCYGM |
KCRGYGWCCTTSRRMYKK |
B1H
Zhu et al.(2011)
ftz-f1_FlyReg_FBgn0001078
|
0.990
|
0.971
|
ftz-f1
M06418_2.00 |
Drosophila melanogaster |
AAGGTCA |
TGACCTT |
B1H
Zhu et al.(2011)
ftz-f1_SANGER_5_FBgn0001078
|
0.990
|
0.971
|
NR5A1
M05613_2.00 |
Homo sapiens |
NNCAAGGYCRN |
NYGRCCTTGNN |
SELEX
Yin et al.(2017)
NR5A1_FL_HT-SELEX
|
0.986
|
0.871
|
Nr5a1
M09322_2.00 |
Mus musculus |
NBYCAAGGYCA |
TGRCCTTGRVN |
Misc
Kulakovskiy et al.(2013)
STF1_MOUSE.H11MO.0.B
|
0.986
|
0.871
|
NR5A1
M11142_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SF1_Q5_01
|
0.986
|
0.871
|
NR5A1
M11143_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SF1_Q5
|
0.986
|
0.871
|
NR5A1
M11144_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SF1_Q6_01
|
0.986
|
0.871
|
NR5A1
M11145_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$SF1_Q6
|
0.986
|
0.871
|
NR5A1
M05614_2.00 |
Homo sapiens |
NNSAAGGHCRN |
NYGDCCTTSNN |
SELEX
Yin et al.(2017)
NR5A1_FL_Methyl-HT-SELEX
|
0.986
|
0.871
|
NR5A2
M05589_2.00 |
Homo sapiens |
YCAAGGYCRYGRCCTTSR |
YSAAGGYCRYGRCCTTGR |
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_1
|
0.984
|
0.857
|
NR5A2
M05590_2.00 |
Homo sapiens |
NYCAAGGTCAH |
DTGACCTTGRN |
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_2
|
0.984
|
0.857
|
NR5A2
M05591_2.00 |
Homo sapiens |
YGRCCTTSVNYSAAGGYCR |
YGRCCTTSRNBSAAGGYCR |
SELEX
Yin et al.(2017)
NR5A2_eDBD_HT-SELEX_3
|
0.984
|
0.857
|
NR5A2
M09271_2.00 |
Homo sapiens |
NBYCAAGGYCA |
TGRCCTTGRVN |
Misc
Kulakovskiy et al.(2013)
NR5A2_HUMAN.H11MO.0.B
|
0.984
|
0.857
|
NR5A2
M11126_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LRH1_Q5_01
|
0.984
|
0.857
|
NR5A2
M11127_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LRH1_Q5
|
0.984
|
0.857
|
NR5A2
M11128_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LRH1_Q6
|
0.984
|
0.857
|
NR5A2
M05592_2.00 |
Homo sapiens |
YCAAGGYCRYGACCTTSR |
YSAAGGTCRYGRCCTTGR |
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_1
|
0.984
|
0.857
|
NR5A2
M05593_2.00 |
Homo sapiens |
NYCAAGGTCRH |
DYGACCTTGRN |
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_2
|
0.984
|
0.857
|
NR5A2
M05594_2.00 |
Homo sapiens |
YGRCCTTSVNBSAAGGYCR |
YGRCCTTSVNBSAAGGYCR |
SELEX
Yin et al.(2017)
NR5A2_eDBD_Methyl-HT-SELEX_3
|
0.984
|
0.857
|
Nr5a2
M00816_2.00 |
Mus musculus |
VAAGGTCR |
YGACCTTB |
PBM
Weirauch et al.(2013)
pTH3468
|
0.981
|
0.843
|
Nr5a2
M08158_2.00 |
Mus musculus |
VRDBTCAAGGYCANN |
NNTGRCCTTGAVHYB |
ChIP-seq
Mathelier et al.(2014)
MA0505.1
|
0.981
|
0.843
|
Nr5a2
M09320_2.00 |
Mus musculus |
NBYCAAGGYCA |
TGRCCTTGRVN |
Misc
Kulakovskiy et al.(2013)
NR5A2_MOUSE.H11MO.0.A
|
0.981
|
0.843
|
Nr5a2
M09616_2.00 |
Mus musculus |
BYCAAGGYCA |
TGRCCTTGRV |
Misc
Heinz et al.(2010)
Pancreas-LRH1_GSE34295
|
0.981
|
0.843
|
Nr5a2
M09615_2.00 |
Mus musculus |
BYCAAGGYCA |
TGRCCTTGRV |
Misc
Heinz et al.(2010)
mES-Nr5a2_GSE19019
|
0.981
|
0.843
|
nhr-25
M08226_2.00 |
Caenorhabditis elegans |
MAAGGTCA |
TGACCTTK |
ChIP-seq
Contrino et al.(2012)
Mw160
|
0.975
|
0.800
|
Hr39
M03942_2.00 |
Drosophila melanogaster |
CAAGGHCRN |
NYGDCCTTG |
SELEX
Nitta et al.(2015)
Hr39_1
|
0.952
|
0.629
|
Hr39
M03943_2.00 |
Drosophila melanogaster |
CAAGGYCRH |
DYGRCCTTG |
SELEX
Nitta et al.(2015)
Hr39_2
|
0.952
|
0.629
|
Hr4
M06435_2.00 |
Drosophila melanogaster |
AAGGTCA |
TGACCTT |
B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546
|
0.842
|
0.614
|
Nr2f6
M00811_2.00 |
Mus musculus |
NRRGGTCANN |
NNTGACCYYN |
PBM
Weirauch et al.(2013)
pTH2193
|
0.830
|
0.529
|
Nr2f6
M03419_2.00 |
Mus musculus |
RAGGTCAADAGGTCA |
TGACCTHTTGACCTY |
SELEX
Jolma et al.(2013)
Nr2f6_1
|
0.830
|
0.529
|
Nr2f6
M03420_2.00 |
Mus musculus |
RRGGTCAAAGGTCA |
TGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
Nr2f6_2
|
0.830
|
0.529
|
usp
M03934_2.00 |
Drosophila melanogaster |
ARRGGTCAAAGGTCA |
TGACCTTTGACCYYT |
SELEX
Nitta et al.(2015)
usp_1
|
0.808
|
0.586
|
usp
M06426_2.00 |
Drosophila melanogaster |
HRRGGTCAH |
DTGACCYYD |
B1H
Zhu et al.(2011)
usp_SANGER_5_FBgn0003964
|
0.808
|
0.586
|
usp
M02709_2.00 |
Drosophila melanogaster |
GGGGTCACSN |
NSGTGACCCC |
SELEX
Mathelier et al.(2014)
MA0016.1
|
0.808
|
0.586
|
usp
M09689_2.00 |
Drosophila melanogaster |
KRGGTCACG |
CGTGACCYM |
Misc
Kulakovskiy et al.(2009)
usp
|
0.808
|
0.586
|
usp
M11191_2.00 |
Drosophila melanogaster |
GRGGTCAYS |
SRTGACCYC |
Transfac
Matys et al.(2006)
I$CF1_01
|
0.808
|
0.586
|
usp
M11192_2.00 |
Drosophila melanogaster |
GGGGTCAYS |
SRTGACCCC |
Transfac
Matys et al.(2006)
I$CF1_02
|
0.808
|
0.586
|
Rxrg
M02400_2.00 |
Mus musculus |
VRGGTCAN |
NTGACCYB |
PBM
Weirauch et al.(2014)
pTH2880
|
0.801
|
0.557
|
RXRG
M03375_2.00 |
Homo sapiens |
RRGGTCAAAGGTCA |
TGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
RXRG_1
|
0.801
|
0.557
|
RXRG
M03376_2.00 |
Homo sapiens |
RRGGTCATGACCYY |
RRGGTCATGACCYY |
SELEX
Jolma et al.(2013)
RXRG_2
|
0.801
|
0.557
|
RXRG
M03377_2.00 |
Homo sapiens |
GRGGTCAAAGGTCA |
TGACCTTTGACCYC |
SELEX
Jolma et al.(2013)
RXRG_3
|
0.801
|
0.557
|
RXRG
M03378_2.00 |
Homo sapiens |
NRGGTCATGACCYC |
GRGGTCATGACCYN |
SELEX
Jolma et al.(2013)
RXRG_4
|
0.801
|
0.557
|
RXRG
M02746_2.00 |
Homo sapiens |
GGTCAAAGGTCA |
TGACCTTTGACC |
SELEX
Jolma et al.(2010)
RXRG_dimer
|
0.801
|
0.557
|
RXRG
M05615_2.00 |
Homo sapiens |
VRGGTCAAAGGTCAN |
NTGACCTTTGACCYB |
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_1
|
0.801
|
0.557
|
RXRG
M05616_2.00 |
Homo sapiens |
RRGGTCAYGACCYY |
RRGGTCRTGACCYY |
SELEX
Yin et al.(2017)
RXRG_FL_HT-SELEX_2
|
0.801
|
0.557
|
RXRG
M05879_2.00 |
Homo sapiens |
RGGTBAARGGTBRND |
HNYVACCYTTVACCY |
SMiLE-seq
Isakova et al.(2017)
RXRg
|
0.801
|
0.557
|
RXRG
M09280_2.00 |
Homo sapiens |
NGTCAAAGGTCAH |
DTGACCTTTGACN |
Misc
Kulakovskiy et al.(2013)
RXRG_HUMAN.H11MO.0.B
|
0.801
|
0.557
|
Rxrg
M09305_2.00 |
Mus musculus |
VDDVDNSVNRAGKTCAAGGYCA |
TGRCCTTGAMCTYNBSNHBHHB |
Misc
Kulakovskiy et al.(2013)
RXRG_MOUSE.H11MO.0.B
|
0.801
|
0.557
|
RXRG
M05617_2.00 |
Homo sapiens |
DRGGTBAARGGTBRN |
NYVACCYTTVACCYH |
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_1
|
0.801
|
0.557
|
RXRG
M05618_2.00 |
Homo sapiens |
VRGGTCAYGACCYB |
VRGGTCRTGACCYB |
SELEX
Yin et al.(2017)
RXRG_FL_Methyl-HT-SELEX_2
|
0.801
|
0.557
|
NR4A1
M05601_2.00 |
Homo sapiens |
NAAAGGTCAN |
NTGACCTTTN |
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_1
|
0.797
|
0.600
|
NR4A1
M05602_2.00 |
Homo sapiens |
NAAAGGTCAN |
NTGACCTTTN |
SELEX
Yin et al.(2017)
NR4A1_eDBD_HT-SELEX_2
|
0.797
|
0.600
|
NR4A1
M08153_2.00 |
Homo sapiens |
NAAAGGTCAN |
NTGACCTTTN |
ChIP-seq
Mathelier et al.(2014)
MA1112.1
|
0.797
|
0.600
|
NR4A1
M09274_2.00 |
Homo sapiens |
AAAKGBCAN |
NTGVCMTTT |
Misc
Kulakovskiy et al.(2013)
NR4A1_HUMAN.H11MO.0.A
|
0.797
|
0.600
|
Nr4a1
M09317_2.00 |
Mus musculus |
NRAADGKCA |
TGMCHTTYN |
Misc
Kulakovskiy et al.(2013)
NR4A1_MOUSE.H11MO.0.B
|
0.797
|
0.600
|
NR4A1
M09608_2.00 |
Homo sapiens |
NNDNAAAGGTCA |
TGACCTTTNHNN |
Misc
Heinz et al.(2010)
K562-NR4A1_GSE31363
|
0.797
|
0.600
|
NR4A1
M11132_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NUR77_Q5_01
|
0.797
|
0.600
|
NR4A1
M11133_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NUR77_Q5_02
|
0.797
|
0.600
|
NR4A1
M11134_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NUR77_Q5
|
0.797
|
0.600
|
NR4A1
M05603_2.00 |
Homo sapiens |
NAAAGGTCRN |
NYGACCTTTN |
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_1
|
0.797
|
0.600
|
NR4A1
M05604_2.00 |
Homo sapiens |
NAAAGGTCRN |
NYGACCTTTN |
SELEX
Yin et al.(2017)
NR4A1_eDBD_Methyl-HT-SELEX_2
|
0.797
|
0.600
|
Nr2c1
M00812_2.00 |
Mus musculus |
NRRGGTCANN |
NNTGACCYYN |
PBM
Weirauch et al.(2013)
pTH1284
|
0.795
|
0.543
|
Nr2c1
M02399_2.00 |
Mus musculus |
RRGGTCAH |
DTGACCYY |
PBM
Weirauch et al.(2014)
pTH3466
|
0.795
|
0.543
|
NR2C1
M05597_2.00 |
Homo sapiens |
NRGKKCRYGAMMYN |
NRKKTCRYGMMCYN |
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_1
|
0.795
|
0.543
|
NR2C1
M05598_2.00 |
Homo sapiens |
NRRGGTCAN |
NTGACCYYN |
SELEX
Yin et al.(2017)
NR2C1_eDBD_HT-SELEX_2
|
0.795
|
0.543
|
NR2C1
M09273_2.00 |
Homo sapiens |
RBYVRVAGGTCAB |
VTGACCTBYBRVY |
Misc
Kulakovskiy et al.(2013)
NR2C1_HUMAN.H11MO.0.C
|
0.795
|
0.543
|
Nr2c1
M09304_2.00 |
Mus musculus |
RBYVRVAGGTCAB |
VTGACCTBYBRVY |
Misc
Kulakovskiy et al.(2013)
NR2C1_MOUSE.H11MO.0.C
|
0.795
|
0.543
|
NR2C1
M05599_2.00 |
Homo sapiens |
NRRGGTCAN |
NTGACCYYN |
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_1
|
0.795
|
0.543
|
NR2C1
M05600_2.00 |
Homo sapiens |
RRGGTCRYGACCYY |
RRGGTCRYGACCYY |
SELEX
Yin et al.(2017)
NR2C1_eDBD_Methyl-HT-SELEX_2
|
0.795
|
0.543
|
Rxra
M00181_2.00 |
Mus musculus |
NRRGGTCANN |
NNTGACCYYN |
PBM
Badis et al.(2009)
Rxra_1035
|
0.792
|
0.571
|
RXRA
M03408_2.00 |
Homo sapiens |
RRGGTCAAAGGTCA |
TGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
RXRA_1
|
0.792
|
0.571
|
RXRA
M03409_2.00 |
Homo sapiens |
RRGGTCATGACCYY |
RRGGTCATGACCYY |
SELEX
Jolma et al.(2013)
RXRA_2
|
0.792
|
0.571
|
RXRA
M03410_2.00 |
Homo sapiens |
RRGGTCAAAGGTCA |
TGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
RXRA_3
|
0.792
|
0.571
|
RXRA
M03411_2.00 |
Homo sapiens |
RRGGTCATGACCYY |
RRGGTCATGACCYY |
SELEX
Jolma et al.(2013)
RXRA_4
|
0.792
|
0.571
|
Rxra
M03421_2.00 |
Mus musculus |
RRGGTCAAAGGTCA |
TGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
Rxra_1
|
0.792
|
0.571
|
Rxra
M03422_2.00 |
Mus musculus |
RGGTCATGACCY |
RGGTCATGACCY |
SELEX
Jolma et al.(2013)
Rxra_2
|
0.792
|
0.571
|
RXRA
M05671_2.00 |
Homo sapiens |
RRGGTCAAAGGTCAN |
NTGACCTTTGACCYY |
SELEX
Yin et al.(2017)
RXRA_eDBD_HT-SELEX
|
0.792
|
0.571
|
RXRA
M05882_2.00 |
Homo sapiens |
VRGKTBAAAGGTYRH |
DYRACCTTTVAMCYB |
SMiLE-seq
Isakova et al.(2017)
RXRa
|
0.792
|
0.571
|
RXRA
M07993_2.00 |
Homo sapiens |
NRRGGTCA |
TGACCYYN |
ChIP-seq
Gerstein et al.(2012)
H1-hESC_RXRA_HudsonAlpha
|
0.792
|
0.571
|
RXRA
M07994_2.00 |
Homo sapiens |
DDNNMRRGGTCANDN |
NHNTGACCYYKNNHH |
ChIP-seq
Gerstein et al.(2012)
HepG2_RXRA_HudsonAlpha
|
0.792
|
0.571
|
RXRA
M09294_2.00 |
Homo sapiens |
VDDDNDNNVRRRGGKCAVDV |
BHBTGMCCYYYBNNHNHHHB |
Misc
Kulakovskiy et al.(2013)
RXRA_HUMAN.H11MO.0.A
|
0.792
|
0.571
|
Rxra
M09306_2.00 |
Mus musculus |
DDVNNNNNRAGKTCAAGGYCA |
TGRCCTTGAMCTYNNNNNBHH |
Misc
Kulakovskiy et al.(2013)
RXRA_MOUSE.H11MO.0.A
|
0.792
|
0.571
|
RXRA
M11182_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RXRA_07
|
0.792
|
0.571
|
RXRA
M05672_2.00 |
Homo sapiens |
RRGGTCAAAGGTCAH |
DTGACCTTTGACCYY |
SELEX
Yin et al.(2017)
RXRA_eDBD_Methyl-HT-SELEX
|
0.792
|
0.571
|
Rxrb
M02402_2.00 |
Mus musculus |
VRGGTCAH |
DTGACCYB |
PBM
Weirauch et al.(2014)
pTH2861
|
0.788
|
0.543
|
RXRB
M03415_2.00 |
Homo sapiens |
RRGGTCAAAGGTCA |
TGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
RXRB_1
|
0.788
|
0.543
|
Rxrb
M03435_2.00 |
Mus musculus |
GRGGTCAAAGGTCA |
TGACCTTTGACCYC |
SELEX
Jolma et al.(2013)
Rxrb_1
|
0.788
|
0.543
|
RXRB
M05681_2.00 |
Homo sapiens |
RRGGTCAAAGGTCAN |
NTGACCTTTGACCYY |
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_1
|
0.788
|
0.543
|
RXRB
M05682_2.00 |
Homo sapiens |
RRGGTCAYGACCYY |
RRGGTCRTGACCYY |
SELEX
Yin et al.(2017)
RXRB_eDBD_HT-SELEX_2
|
0.788
|
0.543
|
RXRB
M09297_2.00 |
Homo sapiens |
DSAGGTCASD |
HSTGACCTSH |
Misc
Kulakovskiy et al.(2013)
RXRB_HUMAN.H11MO.0.C
|
0.788
|
0.543
|
Rxrb
M09330_2.00 |
Mus musculus |
DSAGGTCASD |
HSTGACCTSH |
Misc
Kulakovskiy et al.(2013)
RXRB_MOUSE.H11MO.0.C
|
0.788
|
0.543
|
RXRB
M05683_2.00 |
Homo sapiens |
RRGGTCAAAGGTCRN |
NYGACCTTTGACCYY |
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_1
|
0.788
|
0.543
|
RXRB
M05684_2.00 |
Homo sapiens |
RRGGTCRYGACCYY |
RRGGTCRYGACCYY |
SELEX
Yin et al.(2017)
RXRB_eDBD_Methyl-HT-SELEX_2
|
0.788
|
0.543
|
nr2f2
M02393_2.00 |
Danio rerio |
NNRGGTCAN |
NTGACCYNN |
PBM
Weirauch et al.(2014)
pTH5882
|
0.781
|
0.557
|
Nr2f1
M00822_2.00 |
Mus musculus |
DRGGTCRN |
NYGACCYH |
PBM
Weirauch et al.(2013)
pTH3811
|
0.781
|
0.557
|
NR2F1
M03403_2.00 |
Homo sapiens |
RRGGTCAAAGGTCAN |
NTGACCTTTGACCYY |
SELEX
Jolma et al.(2013)
NR2F1_1
|
0.781
|
0.557
|
NR2F1
M03404_2.00 |
Homo sapiens |
RRGGTCAARAGGTCAN |
NTGACCTYTTGACCYY |
SELEX
Jolma et al.(2013)
NR2F1_2
|
0.781
|
0.557
|
NR2F1
M03405_2.00 |
Homo sapiens |
RRGGTCAN |
NTGACCYY |
SELEX
Jolma et al.(2013)
NR2F1_3
|
0.781
|
0.557
|
NR2F1
M03406_2.00 |
Homo sapiens |
NHRRGGTCANVNG |
CNBNTGACCYYDN |
SELEX
Jolma et al.(2013)
NR2F1_4
|
0.781
|
0.557
|
NR2F1
M05661_2.00 |
Homo sapiens |
NRGGTCAAAGGTCRN |
NYGACCTTTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_1
|
0.781
|
0.557
|
NR2F1
M05662_2.00 |
Homo sapiens |
VRGGTCANYGACCYY |
RRGGTCRNTGACCYB |
SELEX
Yin et al.(2017)
NR2F1_eDBD_HT-SELEX_2
|
0.781
|
0.557
|
NR2F1
M05665_2.00 |
Homo sapiens |
VRGGTCAAAGGTCAN |
NTGACCTTTGACCYB |
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_1
|
0.781
|
0.557
|
NR2F1
M05666_2.00 |
Homo sapiens |
RRGGTCANYGACCYY |
RRGGTCRNTGACCYY |
SELEX
Yin et al.(2017)
NR2F1_FL_HT-SELEX_2
|
0.781
|
0.557
|
NR2F1
M09291_2.00 |
Homo sapiens |
NRRRBSRRRGGKCANVN |
NBNTGMCCYYYSVYYYN |
Misc
Kulakovskiy et al.(2013)
COT1_HUMAN.H11MO.0.C
|
0.781
|
0.557
|
Nr2f1
M09334_2.00 |
Mus musculus |
YARAGGTCA |
TGACCTYTR |
Misc
Kulakovskiy et al.(2013)
COT1_MOUSE.H11MO.0.B
|
0.781
|
0.557
|
NR2F1
M11172_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$COUPTF1_Q6_01
|
0.781
|
0.557
|
NR2F1
M05663_2.00 |
Homo sapiens |
NRGGTCAAAGGTCRN |
NYGACCTTTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_1
|
0.781
|
0.557
|
NR2F1
M05664_2.00 |
Homo sapiens |
NRGGTCANYGACCYH |
DRGGTCRNTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_eDBD_Methyl-HT-SELEX_2
|
0.781
|
0.557
|
NR2F1
M05667_2.00 |
Homo sapiens |
NRGGTCAAAGGTCRN |
NYGACCTTTGACCYN |
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_1
|
0.781
|
0.557
|
NR2F1
M05668_2.00 |
Homo sapiens |
RRGGTCRNYGACCYY |
RRGGTCRNYGACCYY |
SELEX
Yin et al.(2017)
NR2F1_FL_Methyl-HT-SELEX_2
|
0.781
|
0.557
|
Rorb
M00820_2.00 |
Mus musculus |
NRGGTCANN |
NNTGACCYN |
PBM
Weirauch et al.(2013)
pTH3469
|
0.781
|
0.557
|
rorb
M02404_2.00 |
Tetraodon nigroviridis |
NGAGGTCANN |
NNTGACCTCN |
PBM
Weirauch et al.(2014)
pTH6589
|
0.781
|
0.557
|
RORB
M05677_2.00 |
Homo sapiens |
DAWNTRGGTYAGTRGGTCAN |
NTGACCYACTRACCYANWTH |
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_1
|
0.781
|
0.557
|
RORB
M05678_2.00 |
Homo sapiens |
NAWNKRGGTCAYGACCYMNWTN |
NAWNKRGGTCRTGACCYMNWTN |
SELEX
Yin et al.(2017)
RORB_eDBD_HT-SELEX_2
|
0.781
|
0.557
|
RORB
M05883_2.00 |
Homo sapiens |
AWNBRGGTCAN |
NTGACCYVNWT |
SMiLE-seq
Isakova et al.(2017)
RORb
|
0.781
|
0.557
|
RORB
M11187_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RORBETA_Q2
|
0.781
|
0.557
|
RORB
M05679_2.00 |
Homo sapiens |
DAWBTRGGTYAGTRGGTCRN |
NYGACCYACTRACCYAVWTH |
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_1
|
0.781
|
0.557
|
RORB
M05680_2.00 |
Homo sapiens |
NAWNKRGGTCAYGACCYMNWTN |
NAWNKRGGTCRTGACCYMNWTN |
SELEX
Yin et al.(2017)
RORB_eDBD_Methyl-HT-SELEX_2
|
0.781
|
0.557
|
Q969A9_BOMMO
M02410_2.00 |
Bombyx mori |
VRGGTCDN |
NHGACCYB |
PBM
Weirauch et al.(2014)
pTH5516
|
0.780
|
0.543
|
Rora
M00819_2.00 |
Mus musculus |
NNRGGTCA |
TGACCYNN |
PBM
Weirauch et al.(2013)
pTH3464
|
0.779
|
0.543
|
RORA
M03353_2.00 |
Homo sapiens |
NMRAGGTCAAVYYVAGGTCA |
TGACCTBRRBTTGACCTYKN |
SELEX
Jolma et al.(2013)
RORA_1
|
0.779
|
0.543
|
RORA
M03354_2.00 |
Homo sapiens |
WAWSTRGGTYASTAGGTCA |
TGACCTASTRACCYASWTW |
SELEX
Jolma et al.(2013)
RORA_2
|
0.779
|
0.543
|
RORA
M02705_2.00 |
Homo sapiens |
WWVDAGGTCA |
TGACCTHBWW |
SELEX
Mathelier et al.(2014)
MA0071.1
|
0.779
|
0.543
|
RORA
M02706_2.00 |
Homo sapiens |
NDWAWBTAGGTCAN |
NTGACCTAVWTWHN |
SELEX
Mathelier et al.(2014)
MA0072.1
|
0.779
|
0.543
|
RORA
M09265_2.00 |
Homo sapiens |
VWNDRGGBCARDR |
YHYTGVCCYHNWB |
Misc
Kulakovskiy et al.(2013)
RORA_HUMAN.H11MO.0.C
|
0.779
|
0.543
|
Rora
M09327_2.00 |
Mus musculus |
VWNDRGGBCARDR |
YHYTGVCCYHNWB |
Misc
Kulakovskiy et al.(2013)
RORA_MOUSE.H11MO.0.C
|
0.779
|
0.543
|
RORA
M11090_2.00 |
Homo sapiens |
DWWWVDAGGTCAH |
DTGACCTHBWWWH |
Transfac
Matys et al.(2006)
V$RORA1_01
|
0.779
|
0.543
|
RORA
M11091_2.00 |
Homo sapiens |
DWAWBTAGGTCAN |
NTGACCTAVWTWH |
Transfac
Matys et al.(2006)
V$RORA2_01
|
0.779
|
0.543
|
RORA
M11092_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RORALPHA_Q4
|
0.779
|
0.543
|
RORA
M11093_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RORA_Q4
|
0.779
|
0.543
|
Nr2f2
M00184_2.00 |
Mus musculus |
RRGGTCAN |
NTGACCYY |
PBM
Badis et al.(2009)
Nr2f2_2192
|
0.775
|
0.557
|
NR2F2
M08157_2.00 |
Homo sapiens |
NNAAGGTCANN |
NNTGACCTTNN |
ChIP-seq
Mathelier et al.(2014)
MA1111.1
|
0.775
|
0.557
|
NR2F2
M08223_2.00 |
Homo sapiens |
AAAGGTCA |
TGACCTTT |
ChIP-seq
Contrino et al.(2012)
Mv102
|
0.775
|
0.557
|
NR2F2
M08224_2.00 |
Homo sapiens |
GGKCARAGGB |
VCCTYTGMCC |
ChIP-seq
Contrino et al.(2012)
Mv104
|
0.775
|
0.557
|
NR2F2
M09293_2.00 |
Homo sapiens |
NARRGGTCADRDN |
NHYHTGACCYYTN |
Misc
Kulakovskiy et al.(2013)
COT2_HUMAN.H11MO.0.A
|
0.775
|
0.557
|
Nr2f2
M09325_2.00 |
Mus musculus |
NNHRAGGTCANVD |
HBNTGACCTYDNN |
Misc
Kulakovskiy et al.(2013)
COT2_MOUSE.H11MO.0.A
|
0.775
|
0.557
|
NR2F2
M11180_2.00 |
Homo sapiens |
WRRKKTCAARGGYTCA |
TGARCCYTTGAMMYYW |
Transfac
Matys et al.(2006)
V$ARP1_01
|
0.775
|
0.557
|
NR2F2
M11181_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$COUPTF2_Q6
|
0.775
|
0.557
|
Rorc
M09324_2.00 |
Mus musculus |
NDAWSTRRGTCA |
TGACYYASWTHN |
Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B
|
0.770
|
0.529
|
Rorc
M09617_2.00 |
Mus musculus |
AWBTRGGTCA |
TGACCYAVWT |
Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019
|
0.770
|
0.529
|
NR2C2
M03407_2.00 |
Homo sapiens |
VRGGTCAAAGGTCA |
TGACCTTTGACCYB |
SELEX
Jolma et al.(2013)
NR2C2_1
|
0.764
|
0.557
|
NR2C2
M05669_2.00 |
Homo sapiens |
NRGGTCRN |
NYGACCYN |
SELEX
Yin et al.(2017)
NR2C2_eDBD_HT-SELEX
|
0.764
|
0.557
|
NR2C2
M08156_2.00 |
Homo sapiens |
NVRGGTCARAGGKCA |
TGMCCTYTGACCYBN |
ChIP-seq
Mathelier et al.(2014)
MA0504.1
|
0.764
|
0.557
|
NR2C2
M07990_2.00 |
Homo sapiens |
WBYRCTTCCGGGKYV |
BRMCCCGGAAGYRVW |
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_TR4_UCD
|
0.764
|
0.557
|
NR2C2
M07991_2.00 |
Homo sapiens |
DWBYRCTTCCGGGKY |
RMCCCGGAAGYRVWH |
ChIP-seq
Gerstein et al.(2012)
HepG2b_TR4_UCD
|
0.764
|
0.557
|
NR2C2
M07992_2.00 |
Homo sapiens |
WBYRCTTCCGGGKYR |
YRMCCCGGAAGYRVW |
ChIP-seq
Gerstein et al.(2012)
K562b_TR4_UCD
|
0.764
|
0.557
|
NR2C2
M08221_2.00 |
Homo sapiens |
DWBYDCTTCCGGGKY |
RMCCCGGAAGHRVWH |
ChIP-seq
Contrino et al.(2012)
Mv97
|
0.764
|
0.557
|
NR2C2
M08222_2.00 |
Homo sapiens |
TCARAGGTCA |
TGACCTYTGA |
ChIP-seq
Contrino et al.(2012)
Mv98
|
0.764
|
0.557
|
NR2C2
M09292_2.00 |
Homo sapiens |
RBTYMVRGGTCR |
YGACCYBKRAVY |
Misc
Kulakovskiy et al.(2013)
NR2C2_HUMAN.H11MO.0.B
|
0.764
|
0.557
|
Nr2c2
M09303_2.00 |
Mus musculus |
RRGKSARAGGKCA |
TGMCCTYTSMCYY |
Misc
Kulakovskiy et al.(2013)
NR2C2_MOUSE.H11MO.0.A
|
0.764
|
0.557
|
NR2C2
M09611_2.00 |
Homo sapiens |
RRGGTCARAGGTCA |
TGACCTYTGACCYY |
Misc
Heinz et al.(2010)
Hela-TR4_GSE24685
|
0.764
|
0.557
|
NR2C2
M11173_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NR2C2_03
|
0.764
|
0.557
|
NR2C2
M11174_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$NR2C2_04
|
0.764
|
0.557
|
NR2C2
M11175_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_01
|
0.764
|
0.557
|
NR2C2
M11176_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_03
|
0.764
|
0.557
|
NR2C2
M11177_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_Q2_01
|
0.764
|
0.557
|
NR2C2
M11178_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_Q2
|
0.764
|
0.557
|
NR2C2
M11179_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TR4_Q3
|
0.764
|
0.557
|
NR2C2
M05670_2.00 |
Homo sapiens |
NRGGTCRN |
NYGACCYN |
SELEX
Yin et al.(2017)
NR2C2_eDBD_Methyl-HT-SELEX
|
0.764
|
0.557
|
AAEL009588
M02388_2.00 |
Aedes aegypti |
NRGGTCR |
YGACCYN |
PBM
Weirauch et al.(2014)
pTH5508
|
0.752
|
0.500
|
Hr46
M02406_2.00 |
Drosophila melanogaster |
NRGGTCAN |
NTGACCYN |
PBM
Weirauch et al.(2014)
pTH6142
|
0.752
|
0.500
|
Hr46
M03926_2.00 |
Drosophila melanogaster |
RGGTCAGTRGGTCA |
TGACCYACTGACCY |
SELEX
Nitta et al.(2015)
Hr46_1
|
0.752
|
0.500
|
Hr46
M06412_2.00 |
Drosophila melanogaster |
AWKTGGGTYW |
WRACCCAMWT |
B1H
Zhu et al.(2011)
Hr46_FlyReg_FBgn0000448
|
0.752
|
0.500
|
Hr46
M06413_2.00 |
Drosophila melanogaster |
HWNBAGGTCA |
TGACCTVNWD |
B1H
Zhu et al.(2011)
Hr46_SANGER_5_FBgn0000448
|
0.752
|
0.500
|
RORC
M05621_2.00 |
Homo sapiens |
KRGGTCAYGMCCYM |
KRGGKCRTGACCYM |
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_1
|
0.750
|
0.514
|
RORC
M05622_2.00 |
Homo sapiens |
NAWNKRGGTYANTRGGTCAN |
NTGACCYANTRACCYMNWTN |
SELEX
Yin et al.(2017)
RORC_eDBD_HT-SELEX_2
|
0.750
|
0.514
|
RORC
M05880_2.00 |
Homo sapiens |
NDAWNTRGGKCA |
TGMCCYANWTHN |
SMiLE-seq
Isakova et al.(2017)
RORc
|
0.750
|
0.514
|
RORC
M09282_2.00 |
Homo sapiens |
NDAWSTRRGTCA |
TGACYYASWTHN |
Misc
Kulakovskiy et al.(2013)
RORG_HUMAN.H11MO.0.C
|
0.750
|
0.514
|
RORC
M05623_2.00 |
Homo sapiens |
TRGGTCAYGACCYA |
TRGGTCRTGACCYA |
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_1
|
0.750
|
0.514
|
RORC
M05624_2.00 |
Homo sapiens |
NAWNTRGGTYASTAGGTCAN |
NTGACCTASTRACCYANWTN |
SELEX
Yin et al.(2017)
RORC_eDBD_Methyl-HT-SELEX_2
|
0.750
|
0.514
|
RARG
M02397_2.00 |
Homo sapiens |
VGGTCANN |
NNTGACCB |
PBM
Weirauch et al.(2014)
pTH5430
|
0.748
|
0.543
|
Rarg
M00810_2.00 |
Mus musculus |
NNVGKTCANN |
NNTGAMCBNN |
PBM
Weirauch et al.(2013)
pTH4269
|
0.748
|
0.543
|
RARG
M03391_2.00 |
Homo sapiens |
SRGGTCAAAAGGTCAVD |
HBTGACCTTTTGACCYS |
SELEX
Jolma et al.(2013)
RARG_1
|
0.748
|
0.543
|
RARG
M03392_2.00 |
Homo sapiens |
RAGGTCAHVHWRAGGTCA |
TGACCTYWDBDTGACCTY |
SELEX
Jolma et al.(2013)
RARG_2
|
0.748
|
0.543
|
RARG
M03393_2.00 |
Homo sapiens |
RRGGTCAHNNRAGGTCA |
TGACCTYNNDTGACCYY |
SELEX
Jolma et al.(2013)
RARG_3
|
0.748
|
0.543
|
RARG
M03394_2.00 |
Homo sapiens |
GAGGTCAAAAGGTCAY |
RTGACCTTTTGACCTC |
SELEX
Jolma et al.(2013)
RARG_4
|
0.748
|
0.543
|
RARG
M03395_2.00 |
Homo sapiens |
RAGGTCAABYARRGKTCA |
TGAMCYYTRVTTGACCTY |
SELEX
Jolma et al.(2013)
RARG_5
|
0.748
|
0.543
|
RARG
M03396_2.00 |
Homo sapiens |
RAGGTCAHBNVRGGTCA |
TGACCYBNVDTGACCTY |
SELEX
Jolma et al.(2013)
RARG_6
|
0.748
|
0.543
|
Rarg
M03416_2.00 |
Mus musculus |
RRGGTCAAAAGGTCAH |
DTGACCTTTTGACCYY |
SELEX
Jolma et al.(2013)
Rarg_1
|
0.748
|
0.543
|
Rarg
M03417_2.00 |
Mus musculus |
RAGGTCAWVHAAAGGTCA |
TGACCTTTDBWTGACCTY |
SELEX
Jolma et al.(2013)
Rarg_2
|
0.748
|
0.543
|
Rarg
M03418_2.00 |
Mus musculus |
AAGGTCAHSARAGGTCA |
TGACCTYTSDTGACCTT |
SELEX
Jolma et al.(2013)
Rarg_3
|
0.748
|
0.543
|
RARG
M05653_2.00 |
Homo sapiens |
NRGGTCANV |
BNTGACCYN |
SELEX
Yin et al.(2017)
RARG_FL_HT-SELEX
|
0.748
|
0.543
|
RARG
M05649_2.00 |
Homo sapiens |
DRGGTCAAAAGKTCAN |
NTGAMCTTTTGACCYH |
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_1
|
0.748
|
0.543
|
RARG
M05650_2.00 |
Homo sapiens |
RAGGTCATGACCTH |
DAGGTCATGACCTY |
SELEX
Yin et al.(2017)
RARG_eDBD_HT-SELEX_2
|
0.748
|
0.543
|
Rarg
M05885_2.00 |
Mus musculus |
NRGGTCANDRGKKYA |
TRMMCYHNTGACCYN |
SMiLE-seq
Isakova et al.(2017)
RARg
|
0.748
|
0.543
|
RARG
M09289_2.00 |
Homo sapiens |
RGGTCAVVVWGNMMNNDV |
BHNNKKNCWBBBTGACCY |
Misc
Kulakovskiy et al.(2013)
RARG_HUMAN.H11MO.0.B
|
0.748
|
0.543
|
Rarg
M09300_2.00 |
Mus musculus |
RGGTCAVVVWGNMMNNDV |
BHNNKKNCWBBBTGACCY |
Misc
Kulakovskiy et al.(2013)
RARG_MOUSE.H11MO.0.C
|
0.748
|
0.543
|
Rarg
M09613_2.00 |
Mus musculus |
RGKTCAAGGBCA |
TGVCCTTGAMCY |
Misc
Heinz et al.(2010)
ES-RARg_GSE30538
|
0.748
|
0.543
|
RARG
M11167_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$RARG_Q3
|
0.748
|
0.543
|
RARG
M05654_2.00 |
Homo sapiens |
NRGGTCRNV |
BNYGACCYN |
SELEX
Yin et al.(2017)
RARG_FL_Methyl-HT-SELEX
|
0.748
|
0.543
|
RARG
M05651_2.00 |
Homo sapiens |
DRGGTCAARRGGTCRN |
NYGACCYYTTGACCYH |
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_1
|
0.748
|
0.543
|
RARG
M05652_2.00 |
Homo sapiens |
DAGKTCRYGACCYY |
RRGGTCRYGAMCTH |
SELEX
Yin et al.(2017)
RARG_eDBD_Methyl-HT-SELEX_2
|
0.748
|
0.543
|
Q95WG3_ACRMI
M02424_2.00 |
Acropora millepora |
NRAGGTCAN |
NTGACCTYN |
PBM
Weirauch et al.(2014)
pTH6144
|
0.745
|
0.543
|
For this family, TFs with SR scores > 0.745 will likely have a similar motif |