Sjc_0106400 (Schistosoma japonicum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 Sjc_0106400 T307174_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
tll
M02408_2.00
Drosophila melanogaster
NRASGTCAANNN

NNNTTGACSTYN
PBM
Weirauch et al.(2014)
pTH5714
0.915 0.689
tll
M03932_2.00
Drosophila melanogaster
NRAGTCAAAAGTCA

TGACTTTTGACTYN
SELEX
Nitta et al.(2015)
tll_1
0.915 0.689
tll
M03933_2.00
Drosophila melanogaster
NRAGTCAADAAGTCA

TGACTTHTTGACTYN
SELEX
Nitta et al.(2015)
tll_2
0.915 0.689
tll
M06558_2.00
Drosophila melanogaster
WAAAGTCAAM

KTTGACTTTW
B1H
Mathelier et al.(2014)
MA0459.1
0.915 0.689
tll
M06424_2.00
Drosophila melanogaster
AAAGTYA

TRACTTT
B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720
0.915 0.689
tll
M06425_2.00
Drosophila melanogaster
WAAAGTCAAM

KTTGACTTTW
B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720
0.915 0.689
tll
M09688_2.00
Drosophila melanogaster
MAAAGTCAAH

DTTGACTTTK
Misc
Kulakovskiy et al.(2009)
tll
0.915 0.689
tll
M11190_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TLL_Q6
0.915 0.689
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPRT0000010011 Nuclear receptor 14 74

Links

Other Nuclear receptor family TFs
Other Schistosoma japonicum TFs

Invalid Input OrderBy

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action