SMU15026844 (Schmidtea mediterranea)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMU15026844 T307197_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
tll
M02408_2.00
Drosophila melanogaster
NRASGTCAANNN

NNNTTGACSTYN
PBM
Weirauch et al.(2014)
pTH5714
0.986 0.800
tll
M03932_2.00
Drosophila melanogaster
NRAGTCAAAAGTCA

TGACTTTTGACTYN
SELEX
Nitta et al.(2015)
tll_1
0.986 0.800
tll
M03933_2.00
Drosophila melanogaster
NRAGTCAADAAGTCA

TGACTTHTTGACTYN
SELEX
Nitta et al.(2015)
tll_2
0.986 0.800
tll
M06558_2.00
Drosophila melanogaster
WAAAGTCAAM

KTTGACTTTW
B1H
Mathelier et al.(2014)
MA0459.1
0.986 0.800
tll
M06424_2.00
Drosophila melanogaster
AAAGTYA

TRACTTT
B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720
0.986 0.800
tll
M06425_2.00
Drosophila melanogaster
WAAAGTCAAM

KTTGACTTTW
B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720
0.986 0.800
tll
M09688_2.00
Drosophila melanogaster
MAAAGTCAAH

DTTGACTTTK
Misc
Kulakovskiy et al.(2009)
tll
0.986 0.800
tll
M11190_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TLL_Q6
0.986 0.800
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN

NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.917 0.714
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN

NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.917 0.714
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN

NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.917 0.714
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA

TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.917 0.714
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA

TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.917 0.714
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW

WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.917 0.714
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA

TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.917 0.714
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN

NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.917 0.714
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN

NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.917 0.714
dsf
M06431_2.00
Drosophila melanogaster
AAAAGTCANH

DNTGACTTTT
B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381
0.861 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15026844 Nuclear receptor 41 118

Links

Other Nuclear receptor family TFs
Other Schmidtea mediterranea TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
nAv.1.0.1.g01027 Acanthocheilonema viteae nAv.1.0.1.g01027 I 0.981
ACYPI009360 Acyrthosiphon pisum ACYPI009360 I 0.966
ACYPI56792 Acyrthosiphon pisum ACYPI56792 I 0.866
AAEL003020 Aedes aegypti AAEL003020 I 0.987
AAEL005381 Aedes aegypti AAEL005381 I 0.863
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.917
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.917
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.917
ANCCAN_24590 Ancylostoma caninum ANCCAN_24590 I 0.982
ACAC_0001268701 Angiostrongylus cantonensis ACAC_0001268701 I 0.982
ACOC_0000908001 Angiostrongylus costaricensis ACOC_0000908001 I 0.982
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.917
AALB000508 Anopheles albimanus AALB000508 I 0.863
AALB003284 Anopheles albimanus AALB003284 I 0.986
AARA011806 Anopheles arabiensis AARA011806 I 0.863
AARA002508 Anopheles arabiensis AARA002508 I 0.987
AATE017601 Anopheles atroparvus AATE017601 I 0.863
AATE006814 Anopheles atroparvus AATE006814 I 0.987
ACHR006241 Anopheles christyi ACHR006241 I 0.863
ACOM036097 Anopheles coluzzii ACOM036097 I 0.987
ACOM032542 Anopheles coluzzii ACOM032542 I 0.863
ACUA015273 Anopheles culicifacies ACUA015273 I 0.987
ADAC006907 Anopheles darlingi ADAC006907 I 0.986
ADIR001527 Anopheles dirus ADIR001527 I 0.986
ADIR011495 Anopheles dirus ADIR011495 I 0.863
AEPI011017 Anopheles epiroticus AEPI011017 I 0.987
AFAF007327 Anopheles farauti AFAF007327 I 0.863
AFAF018214 Anopheles farauti AFAF018214 I 0.987
AFUN007550 Anopheles funestus AFUN007550 I 0.987
AFUN008855 Anopheles funestus AFUN008855 I 0.863
AGAP009575 Anopheles gambiae AGAP009575 I 0.863
AGAP000819 Anopheles gambiae AGAP000819 I 0.987
AMAM000431 Anopheles maculatus AMAM000431 I 0.987
AMEC009570 Anopheles melas AMEC009570 I 0.863
AMEC019536 Anopheles melas AMEC019536 I 0.987
AMEM005434 Anopheles merus AMEM005434 I 0.987
AMIN005547 Anopheles minimus AMIN005547 I 0.987
AQUA007553 Anopheles quadriannulatus AQUA007553 I 0.863
AQUA002816 Anopheles quadriannulatus AQUA002816 I 0.987
ASIS014807 Anopheles sinensis ASIS014807 I 0.987
ASTEI01071 Anopheles stephensi ASTEI01071 I 0.987
ASTEI03772 Anopheles stephensi ASTEI03772 I 0.863
GB50436 Apis mellifera GB50436 I 0.983
GB50458 Apis mellifera GB50458 I 0.844
ALUE_0000403201 Ascaris lumbricoides ALUE_0000403201 I 0.981
ASU_07782 Ascaris suum ASU_07782 I 0.981
ACEP27077 Atta cephalotes ACEP27077 I 0.854
BGLB000662 Biomphalaria glabrata BGLB000662 I 0.845
BGIBMGA002000 Bombyx mori BGIBMGA002000 I 0.981
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.917
NR2E1 Bos taurus ENSBTAG00000013991 I 0.917
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I 0.901
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I 0.901
Bm12516 Brugia malayi Bm12516 I 0.981
Bm2078 Brugia malayi Bm2078 I 0.981
BTMF_0000437701 Brugia timori BTMF_0000437701 I 0.981
BXY_1057700 Bursaphelenchus xylophilus BXY_1057700 I 0.745
BXY_0039800 Bursaphelenchus xylophilus BXY_0039800 I 0.957
CBN17159 Caenorhabditis brenneri CBN17159 I 0.987
CBN02507 Caenorhabditis brenneri CBN02507 I 0.987
CBG06024 Caenorhabditis briggsae CBG06024 I 0.987
nhr-67 Caenorhabditis elegans WBGene00003657 I 0.983
nhr-236 Caenorhabditis elegans WBGene00021417 I 0.755
CRE12569 Caenorhabditis remanei CRE12569 I 0.987
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.917
Aan_R007044 Calypte anna Aan_R007044 I 0.917
Cflo_06716--XP_001121187.1_APIME Camponotus floridanus Cflo_06716--XP_001121187.1_APIME I 0.983
Cflo_04264--XP_624265.2_APIME Camponotus floridanus Cflo_04264--XP_624265.2_APIME I 0.854
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.917
CapteG224811 Capitella teleta CapteG224811 I 0.839
CapteG226190 Capitella teleta CapteG226190 I 0.987
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.917
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.917
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.917
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.917
CLEC025112 Cimex lectularius CLEC025112 I 0.862
CLEC004804 Cimex lectularius CLEC004804 I 0.981
csin111366 Clonorchis sinensis csin111366 I 0.988
CGI_10028920 Crassostrea gigas CGI_10028920 I 0.986
CGI_10028921 Crassostrea gigas CGI_10028921 I 0.985
CpipJ_CPIJ012467 Culex pipiens CpipJ_CPIJ012467 I 0.987
CPIJ012467 Culex quinquefasciatus CPIJ012467 I 0.987
KGM_21528 Danaus plexippus KGM_21528 I 0.981
KGM_12726 Danaus plexippus KGM_12726 I 0.859
KGM_01261 Danaus plexippus KGM_01261 I 0.859
nr2e1 Danio rerio ENSDARG00000017107 I 0.917
DAPPUDRAFT_299738 Daphnia pulex DAPPUDRAFT_299738 I 0.985
DAPPUDRAFT_299736 Daphnia pulex DAPPUDRAFT_299736 I 0.863
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.917
YQE_11038 Dendroctonus ponderosae YQE_11038 I 0.964
YQE_10677 Dendroctonus ponderosae YQE_10677 I 0.863
nDi.2.2.2.g02413 Dirofilaria immitis nDi.2.2.2.g02413 I 0.817
nDi.2.2.2.g02808 Dirofilaria immitis nDi.2.2.2.g02808 I 0.981
DME_0000202701 Dracunculus medinensis DME_0000202701 I 0.980
GF22927 Drosophila ananassae FBgn0099921 I 0.986
GF15588 Drosophila ananassae FBgn0092613 I 0.861
GG25103 Drosophila erecta FBgn0117232 I 0.861
GG11781 Drosophila erecta FBgn0104076 I 0.986
GH14219 Drosophila grimshawi FBgn0121695 I 0.986
GH11011 Drosophila grimshawi FBgn0118492 I 0.861
tll Drosophila melanogaster FBgn0003720 D 0.986
dsf Drosophila melanogaster FBgn0015381 D 0.861
GI22125 Drosophila mojavensis FBgn0144854 I 0.986
GI17531 Drosophila mojavensis FBgn0140275 I 0.861
GL19043 Drosophila persimilis FBgn0156644 I 0.861
GL13521 Drosophila persimilis FBgn0151126 I 0.986
GA21482 Drosophila pseudoobscura FBgn0081468 I 0.861
GA12521 Drosophila pseudoobscura FBgn0072567 I 0.986
GM18579 Drosophila sechellia FBgn0173485 I 0.861
GD23369 Drosophila simulans FBgn0194755 I 0.861
GD21550 Drosophila simulans FBgn0192976 I 0.986
GJ15408 Drosophila virilis FBgn0202602 I 0.861
tll Drosophila virilis FBgn0013145 I 0.986
GK14159 Drosophila willistoni FBgn0216165 I 0.986
GK14705 Drosophila willistoni FBgn0216711 I 0.861
GE25723 Drosophila yakuba FBgn0242781 I 0.861
GE10907 Drosophila yakuba FBgn0228739 I 0.986
ECANG7_04037 Echinococcus canadensis ECANG7_04037 I 0.970
EEL_0000988401 Elaeophora elaphi EEL_0000988401 I 0.981
EVEC_0000945501 Enterobius vermicularis EVEC_0000945501 I 0.982
NR2E1 Equus caballus ENSECAG00000018990 I 0.917
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.917
NR2E1 Felis catus ENSFCAG00000002255 I 0.917
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.917
ENSGMOG00000008342 Gadus morhua ENSGMOG00000008342 I 0.761
ENSGMOG00000002967 Gadus morhua ENSGMOG00000002967 I 0.756
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I 0.920
NR2E1 Gallus gallus ENSGALG00000015305 I 0.917
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I 0.920
Gfo_R016106 Geospiza fortis Gfo_R016106 I 0.901
GPLIN_000079400 Globodera pallida GPLIN_000079400 I 0.988
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.917
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.917
HCOI00499200 Haemonchus contortus HCOI00499200 I 0.982
HCOI00563400 Haemonchus contortus HCOI00563400 I 0.982
HPLM_0000273901 Haemonchus placei HPLM_0000273901 I 0.982
HHAL007294-PA Halyomorpha halys HHAL007294-PA I 0.984
HHAL003045-PA Halyomorpha halys HHAL003045-PA I 0.866
Hsal_06558--XP_001121187.1_APIME Harpegnathos saltator Hsal_06558--XP_001121187.1_APIME I 0.983
Hsal_12124--XP_624265.2_APIME Harpegnathos saltator Hsal_12124--XP_624265.2_APIME I 0.854
HMEL012854 Heliconius melpomene HMEL012854 I 0.981
HPBE_0001512201 Heligmosomoides bakeri HPBE_0001512201 I 0.946
HelroG81672 Helobdella robusta HelroG81672 I 0.851
HelroG194580 Helobdella robusta HelroG194580 I 0.957
HelroG71774 Helobdella robusta HelroG71774 I 0.982
NR2E1 Homo sapiens ENSG00000112333 D 0.917
TTAC_0000853401 Hydatigera taeniaeformis TTAC_0000853401 I 0.984
HDID_0000867201 Hymenolepis diminuta HDID_0000867201 I 0.984
HmN_000489600 Hymenolepis microstoma HmN_000489600 I 0.984
HNAJ_0000904901 Hymenolepis nana HNAJ_0000904901 I 0.984
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.917
ISCW010891 Ixodes scapularis ISCW010891 I 0.983
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I 0.920
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.917
ENSLOCG00000013459 Lepisosteus oculatus ENSLOCG00000013459 I 0.756
LDEC003555 Leptinotarsa decemlineata LDEC003555 I 0.863
LDEC005682 Leptinotarsa decemlineata LDEC005682 I 0.940
LotgiG130367 Lottia gigantea LotgiG130367 I 0.986
LotgiG135497 Lottia gigantea LotgiG135497 I 0.826
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.917
LCUP000197 Lucilia cuprina LCUP000197 I 0.986
LCUP005636 Lucilia cuprina LCUP005636 I 0.861
LLOJ000605 Lutzomyia longipalpis LLOJ000605 I 0.986
LLOJ008560 Lutzomyia longipalpis LLOJ008560 I 0.861
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.917
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.917
MESCA004444 Megaselia scalaris MESCA004444 I 0.865
MCINX005281 Melitaea cinxia MCINX005281 I 0.859
genemark-nMf.1.1.scaf00299-processed-gene-0.6 Meloidogyne floridensis genemark-nMf.1.1.scaf00299-processed-gene-0.6 I 0.989
Minc11620 Meloidogyne incognita Minc11620 I 0.989
Minc12751 Meloidogyne incognita Minc12751 I 0.989
Minc12749 Meloidogyne incognita Minc12749 I 0.989
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.917
MDOA000688 Musca domestica MDOA000688 I 0.986
MDOA002279 Musca domestica MDOA002279 I 0.865
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.917
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.917
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.917
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I 0.868
NBR_0002150401 Nippostrongylus brasiliensis NBR_0002150401 I 0.982
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.917
OFLC_0001242901 Onchocerca flexuosa OFLC_0001242901 I 0.981
nOo.2.0.1.g00175 Onchocerca ochengi nOo.2.0.1.g00175 I 0.981
WBGene00241769 Onchocerca volvulus WBGene00241769 I 0.981
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.917
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I 0.920
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.917
nr2e1 Oryzias latipes ENSORLG00000013426 I 0.920
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.917
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.917
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.917
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.917
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.917
PTRK_0000518200 Parastrongyloides trichosuri PTRK_0000518200 I 0.987
PHUM596250 Pediculus humanus PHUM596250 I 0.866
PHUM331460 Pediculus humanus PHUM331460 I 0.985
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.917
PPAI008488 Phlebotomus papatasi PPAI008488 I 0.861
PPAI002209 Phlebotomus papatasi PPAI002209 I 0.961
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I 0.920
ENSPFOG00000001827 Poecilia formosa ENSPFOG00000001827 I 0.748
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.917
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.917
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.917
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.917
RSKR_0000792200 Rhabditophanes kr3021 RSKR_0000792200 I 0.986
RPRC007025 Rhodnius prolixus RPRC007025 I 0.983
nRc.2.0.1.g16033 Romanomermis culicivorax nRc.2.0.1.g16033 I 0.979
Sakowv30031927m.g Saccoglossus kowalevskii Sakowv30031927m.g I 0.880
Sakowv30026672m.g Saccoglossus kowalevskii Sakowv30026672m.g I 0.929
ENSSHAG00000009578 Sarcophilus harrisii ENSSHAG00000009578 I 0.765
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.917
ENSSHAG00000007693 Sarcophilus harrisii ENSSHAG00000007693 I 0.807
SSLN_0001329801 Schistocephalus solidus SSLN_0001329801 I 0.977
Sjc_0106400 Schistosoma japonicum Sjc_0106400 I 0.922
Smp_155250 Schistosoma mansoni Smp_155250 I 0.984
SMU15014023 Schmidtea mediterranea SMU15014023 I 0.993
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.923
SMU15032661 Schmidtea mediterranea SMU15032661 I 0.993
NR2E1 Sorex araneus ENSSARG00000013555 I 0.917
L596_g15766 Steinernema carpocapsae L596_g15766 I 0.987
L889_g31911 Steinernema feltiae L889_g31911 I 0.987
L893_g4326 Steinernema glaseri L893_g4326 I 0.987
L898_g6157 Steinernema monticolum L898_g6157 I 0.987
L892_g15278 Steinernema scapterisci L892_g15278 I 0.987
SMAR006008 Strigamia maritima SMAR006008 I 0.984
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I 0.932
SPU_024486 Strongylocentrotus purpuratus SPU_024486 I 0.880
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I 0.932
SPAL_0001263800 Strongyloides papillosus SPAL_0001263800 I 0.987
SSTP_0000630700 Strongyloides stercoralis SSTP_0000630700 I 0.988
SVE_0117200 Strongyloides venezuelensis SVE_0117200 I 0.987
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.917
TASK_0000491201 Taenia asiatica TASK_0000491201 I 0.970
TsM_000278500 Taenia solium TsM_000278500 I 0.970
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.917
nr2e1 Takifugu rubripes ENSTRUG00000001893 I 0.920
TELCIR_04430 Teladorsagia circumcincta TELCIR_04430 I 0.982
tetur08g01210 Tetranychus urticae tetur08g01210 I 0.981
tetur01g02690 Tetranychus urticae tetur01g02690 I 0.844
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I 0.920
TCLT_0000820901 Thelazia callipaeda TCLT_0000820901 I 0.982
TCNE_0000809801 Toxocara canis TCNE_0000809801 I 0.981
TC001069 Tribolium castaneum TC001069 I 0.863
TC000441 Tribolium castaneum TC000441 I 0.945
D917_09121 Trichinella nativa D917_09121 I 0.983
EFV59616 Trichinella spiralis EFV59616 I 0.983
TRE_0001185401 Trichobilharzia regenti TRE_0001185401 I 0.984
TMUE_s0114001400 Trichuris muris TMUE_s0114001400 I 0.980
D918_06154 Trichuris suis D918_06154 I 0.980
TTRE_0000057901 Trichuris trichiura TTRE_0000057901 I 0.980
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.917
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.917
WUBG_10076 Wuchereria bancrofti WUBG_10076 I 0.981
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.916
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.916
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I 0.920