CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc16037
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc16037
T307432_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc16037
Nuclear receptor
25
97
QKCSVCGDLSTGLHYRAITCEGCKGFFRRVYQREPRFVCKSKLPNQKCPISKTTRNDCQRCRLEKCLDAGMDP
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf00849-augustus-gene-0.9
Meloidogyne floridensis
maker-nMf.1.1.scaf00849-augustus-gene-0.9
N
0.991
Minc14819
Meloidogyne incognita
Minc14819
N
0.991
maker-nMf.1.1.scaf03338-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf03338-augustus-gene-0.3
N
0.956
NBR_0000650501
Nippostrongylus brasiliensis
NBR_0000650501
I
0.896
HCOI00493700
Haemonchus contortus
HCOI00493700
I
0.863
HPLM_0002138101
Haemonchus placei
HPLM_0002138101
I
0.863
HCOI00086900
Haemonchus contortus
HCOI00086900
I
0.863
DICVIV_04175
Dictyocaulus viviparus
DICVIV_04175
I
0.844
maker-nMf.1.1.scaf02270-augustus-gene-0.6
Meloidogyne floridensis
maker-nMf.1.1.scaf02270-augustus-gene-0.6
N
0.818
ANCCAN_16811
Ancylostoma caninum
ANCCAN_16811
I
0.807
D918_01741
Trichuris suis
D918_01741
I
0.804
TMUE_s0249000200
Trichuris muris
TMUE_s0249000200
I
0.804
TTRE_0000267601
Trichuris trichiura
TTRE_0000267601
I
0.804
SPU_018861
Strongylocentrotus purpuratus
SPU_018861
I
0.795
EVEC_0001151201
Enterobius vermicularis
EVEC_0001151201
I
0.789
SSTP_0000751800
Strongyloides stercoralis
SSTP_0000751800
I
0.788
nRc.2.0.1.g44932
Romanomermis culicivorax
nRc.2.0.1.g44932
I
0.785
PTRK_0000106800
Parastrongyloides trichosuri
PTRK_0000106800
I
0.784
Sakowv30005248m.g
Saccoglossus kowalevskii
Sakowv30005248m.g
I
0.778
ASU_05171
Ascaris suum
ASU_05171
I
0.776
PEQ_0000899501
Parascaris equorum
PEQ_0000899501
I
0.776
ALUE_0001175901
Ascaris lumbricoides
ALUE_0001175901
I
0.776
ENSCING00000021968
Ciona intestinalis
ENSCING00000021968
I
0.769
SPAL_0001069200
Strongyloides papillosus
SPAL_0001069200
I
0.765
SVE_1651600
Strongyloides venezuelensis
SVE_1651600
I
0.765
estExt_gwp.C_2760053
Branchiostoma floridae
estExt_gwp.C_2760053
I
0.755
estExt_fgenesh2_pg.C_120005
Branchiostoma floridae
estExt_fgenesh2_pg.C_120005
I
0.755
LOAG_09892
Loa loa
LOAG_09892
I
0.749
nLs.2.1.2.g05740
Litomosoides sigmodontis
nLs.2.1.2.g05740
I
0.748
CGI_10028547
Crassostrea gigas
CGI_10028547
I
0.747