CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AFAF019254
(
Anopheles farauti
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
AFAF019254
T307616_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR
YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.981
0.829
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.905
0.714
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.905
0.714
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF019254-PA
Nuclear receptor
29
98
KICSVCGDKALGYNFNAVTCESCKAFFRRNALSTKSFTCPFSENCDITVVTRRFCQRCRLEKCFRIGMKK
Links
Other
Nuclear receptor
family TFs
Other
Anopheles farauti
TFs
159 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy