ACOC_0000732601 (Angiostrongylus costaricensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 ACOC_0000732601 T307926_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN

NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.971 0.746
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACOC_0000732601-mRNA-1 Nuclear receptor 58 124

Links

Other Nuclear receptor family TFs
Other Angiostrongylus costaricensis TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.971
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.962
ASU_10946 Ascaris suum ASU_10946 I 0.970
Bm14724 Brugia malayi Bm14724 I 0.970
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.970
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.962
CBG07552 Caenorhabditis briggsae CBG07552 I 0.971
CBN19233 Caenorhabditis brenneri CBN19233 I 0.971
CJA13646 Caenorhabditis japonica CJA13646 I 0.971
CRE15289 Caenorhabditis remanei CRE15289 I 0.971
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.957
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.949
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.971
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.971
L892_g650 Steinernema scapterisci L892_g650 I 0.971
L893_g29555 Steinernema glaseri L893_g29555 I 0.970
LOAG_18352 Loa loa LOAG_18352 I 0.970
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.947
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.947
Minc01725 Meloidogyne incognita Minc01725 I 0.947
Minc13525 Meloidogyne incognita Minc13525 I 0.947
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.970
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.970
NECAME_04545 Necator americanus NECAME_04545 I 0.971
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.971
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.970
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.970
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.971
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.970
PPA20304 Pristionchus pacificus PPA20304 I 0.967
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.970
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.947
SVUK_0001012101 Strongylus vulgaris SVUK_0001012101 I 0.836
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.968
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.970
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.971
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.970
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.970