ASIM_0001569801 (Anisakis simplex)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 ASIM_0001569801 T308136_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.893 0.671
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.885 0.571
nhr-154
M00698_2.00
Caenorhabditis elegans
NRBRYCAHWD

HWDTGRYVYN
PBM
Narasimhan et al.(2015)
pTH10650
0.824 0.571
CBG23380
M01296_2.00
Caenorhabditis briggsae
NDBDHHANWN

NWNTDDHVHN
PBM
Lambert et al.(2019)
pTH11449
0.822 0.586
nhr-204
M00704_2.00
Caenorhabditis elegans
NDNTGRTMHN

NDKAYCANHN
PBM
Narasimhan et al.(2015)
pTH10028
0.779 0.471
CBG26996_CONSTRUCT
M01300_2.00
PBM CONSTRUCTS
NNNNTGRWMN

NKWYCANNNN
PBM
Lambert et al.(2019)
pTH11460
0.758 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ASIM_0001569801-mRNA-1 Nuclear receptor 6 75

Links

Other Nuclear receptor family TFs
Other Anisakis simplex TFs

Invalid Input OrderBy

245 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action