DICVIV_03942 (Dictyocaulus viviparus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 DICVIV_03942 T308456_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.894 0.671
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.786 0.757
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.786 0.757
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DICVIV_03942 Nuclear receptor 57 126

Links

Other Nuclear receptor family TFs
Other Dictyocaulus viviparus TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29613.m000367 Ricinus communis 29613.m000367 N 0.000
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.000
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.000
AMTR_s00025p00244880 Amborella trichopoda AMTR_s00025p00244880 N 0.000
Aquca_005_00477 Aquilegia coerulea Aquca_005_00477 N 0.000
Aquca_015_00242 Aquilegia coerulea Aquca_015_00242 N 0.000
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.000
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.000
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.000
AGL61 Arabidopsis thaliana AT2G24840 N 0.000
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.000
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.000
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.000
Bo4g157220 Brassica oleracea Bo4g157220 N 0.000
Bo8g099550 Brassica oleracea Bo8g099550 N 0.000
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.000
Bostr.7867s1515 Boechera stricta Bostr.7867s1515 N 0.000
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.000
Bra007829 Brassica rapa Bra007829 N 0.000
Bra026764 Brassica rapa Bra026764 N 0.000
Bra032057 Brassica rapa Bra032057 N 0.000
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.000
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.000
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.000
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.000
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.000
chr5.LjT25B19.190.nd Lotus japonicus chr5.LjT25B19.190.nd N 0.000
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.000
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.000
Cla006571 Citrullus lanatus Cla006571 N 0.000
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.000
Eucgr.G01185 Eucalyptus grandis Eucgr.G01185 N 0.000
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.000
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.000
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.000
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.000
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.000
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.000
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.000
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.000
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.000
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.000
evm.TU.supercontig_505.4 Carica papaya evm.TU.supercontig_505.4 N 0.000
evm.TU.supercontig_625.4 Carica papaya evm.TU.supercontig_625.4 N 0.000
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.000
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.000
F775_04223 Aegilops tauschii F775_04223 I 0.000
F775_43210 Aegilops tauschii F775_43210 I 0.000
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.000
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.000
Gorai.012G163200 Gossypium raimondii Gorai.012G163200 N 0.000
Gorai.N026300 Gossypium raimondii Gorai.N026300 N 0.000
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.000
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.000
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.000
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.000
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.000
MDP0000221590 Malus domestica MDP0000221590 N 0.000
MDP0000434703 Malus domestica MDP0000434703 I 0.000
mgf018529m Mimulus guttatus mgf018529m N 0.000
mgf022147m Mimulus guttatus mgf022147m N 0.000
mgf024307m Mimulus guttatus mgf024307m N 0.000
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.000
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.000
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.000
OBART01G45740 Oryza barthii OBART01G45740 N 0.000
OBART09G00850 Oryza barthii OBART09G00850 N 0.000
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.000
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.000
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.000
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.000
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.000
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.000
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.000
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.000
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.000
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.000
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.000
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.000
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.000
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.000
OS01G0975800 Oryza sativa OS01G0975800 N 0.000
OS09G0116800 Oryza sativa OS09G0116800 N 0.000
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.000
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.000
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.000
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.000
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.000
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.000
Pm021070 Prunus mume Pm021070 N 0.000
Pm021071 Prunus mume Pm021071 N 0.000
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.000
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.000
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.000
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.000
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.000
scaffold_400572.1 Arabidopsis lyrata scaffold_400572.1 N 0.000
Si019951m.g Setaria italica Si019951m.g I 0.000
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.000
TCM_006323 Theobroma cacao TCM_006323 N 0.000
TCM_006325 Theobroma cacao TCM_006325 N 0.000
TCM_040735 Theobroma cacao TCM_040735 N 0.000
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.000
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.000
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.000
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.000
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.000
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.000