GPLIN_000097300 (Globodera pallida)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 GPLIN_000097300 T308656_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN

NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.822 0.643
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN

NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.822 0.643
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN

NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.822 0.643
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA

TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.822 0.643
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA

TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.822 0.643
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW

WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.822 0.643
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA

TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.822 0.643
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN

NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.822 0.643
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN

NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.822 0.643
dsf
M06431_2.00
Drosophila melanogaster
AAAAGTCANH

DNTGACTTTT
B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381
0.767 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_000097300 Nuclear receptor 9 78

Links

Other Nuclear receptor family TFs
Other Globodera pallida TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D 0.822
AAEL005381 Aedes aegypti AAEL005381 I 0.769
AALB000508 Anopheles albimanus AALB000508 I 0.769
AALB002684 Anopheles albimanus AALB002684 I 0.969
Aan_R007044 Calypte anna Aan_R007044 I 0.822
AARA001809 Anopheles arabiensis AARA001809 I 0.969
AARA011806 Anopheles arabiensis AARA011806 I 0.769
AATE006105 Anopheles atroparvus AATE006105 I 0.969
AATE017601 Anopheles atroparvus AATE017601 I 0.769
ACAC_0001268701 Angiostrongylus cantonensis ACAC_0001268701 I 0.789
ACEP27077 Atta cephalotes ACEP27077 I 0.797
ACHR006241 Anopheles christyi ACHR006241 I 0.769
ACOC_0000908001 Angiostrongylus costaricensis ACOC_0000908001 I 0.789
ACOM032542 Anopheles coluzzii ACOM032542 I 0.769
ACOM033973 Anopheles coluzzii ACOM033973 I 0.969
ACUA020513 Anopheles culicifacies ACUA020513 I 0.969
ACYPI56792 Acyrthosiphon pisum ACYPI56792 I 0.770
ADIR010552 Anopheles dirus ADIR010552 I 0.969
ADIR011495 Anopheles dirus ADIR011495 I 0.769
AEPI001141 Anopheles epiroticus AEPI001141 I 0.969
AFAF007327 Anopheles farauti AFAF007327 I 0.769
AFAF018414 Anopheles farauti AFAF018414 I 0.969
AFUN001116 Anopheles funestus AFUN001116 I 0.969
AFUN008855 Anopheles funestus AFUN008855 I 0.769
AGAP001348 Anopheles gambiae AGAP001348 I 0.969
AGAP009575 Anopheles gambiae AGAP009575 I 0.769
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I 0.822
ALUE_0000403201 Ascaris lumbricoides ALUE_0000403201 I 0.753
ALUE_0000688601 Ascaris lumbricoides ALUE_0000688601 I 0.977
AMAM020935 Anopheles maculatus AMAM020935 I 0.969
AMEC009570 Anopheles melas AMEC009570 I 0.769
AMEC010971 Anopheles melas AMEC010971 I 0.969
AMEM007574 Anopheles merus AMEM007574 I 0.969
AMIN000538 Anopheles minimus AMIN000538 I 0.969
ANCCAN_24590 Ancylostoma caninum ANCCAN_24590 I 0.789
AQUA006534 Anopheles quadriannulatus AQUA006534 I 0.969
AQUA007553 Anopheles quadriannulatus AQUA007553 I 0.769
ASIS017452 Anopheles sinensis ASIS017452 I 0.969
ASTEI03772 Anopheles stephensi ASTEI03772 I 0.769
ASTEI07503 Anopheles stephensi ASTEI07503 I 0.969
ASU_00538 Ascaris suum ASU_00538 I 0.977
ASU_07782 Ascaris suum ASU_07782 I 0.753
augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 N 0.933
A_04980 Schistosoma haematobium A_04980 I 0.755
BGIBMGA000670 Bombyx mori BGIBMGA000670 I 0.958
BGLB000662 Biomphalaria glabrata BGLB000662 I 0.795
BGLB009763 Biomphalaria glabrata BGLB009763 I 0.975
Bm12516 Brugia malayi Bm12516 I 0.753
Bm2078 Brugia malayi Bm2078 I 0.753
BTMF_0000437701 Brugia timori BTMF_0000437701 I 0.753
BXY_0757200 Bursaphelenchus xylophilus BXY_0757200 I 0.959
CapteG224811 Capitella teleta CapteG224811 I 0.774
CapteG53417 Capitella teleta CapteG53417 I 0.979
CBG16821 Caenorhabditis briggsae CBG16821 I 0.967
CBN10913 Caenorhabditis brenneri CBN10913 I 0.973
Cflo_04264--XP_624265.2_APIME Camponotus floridanus Cflo_04264--XP_624265.2_APIME I 0.797
Cflo_11610--XP_624042.1_APIME Camponotus floridanus Cflo_11610--XP_624042.1_APIME I 0.960
CGI_10027671 Crassostrea gigas CGI_10027671 I 0.975
CLEC008419 Cimex lectularius CLEC008419 I 0.958
CLEC025112 Cimex lectularius CLEC025112 I 0.762
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I 0.822
CPIJ017884 Culex quinquefasciatus CPIJ017884 I 0.969
CpipJ_CPIJ017884 Culex pipiens CpipJ_CPIJ017884 I 0.969
D917_07429 Trichinella nativa D917_07429 I 0.960
D918_08129 Trichuris suis D918_08129 I 0.947
DAPPUDRAFT_116667 Daphnia pulex DAPPUDRAFT_116667 I 0.971
DAPPUDRAFT_299736 Daphnia pulex DAPPUDRAFT_299736 I 0.792
DME_0000202701 Dracunculus medinensis DME_0000202701 I 0.761
DME_0000705401 Dracunculus medinensis DME_0000705401 I 0.976
dsf Drosophila melanogaster FBgn0015381 D 0.767
EEL_0000988401 Elaeophora elaphi EEL_0000988401 I 0.753
EFV59394 Trichinella spiralis EFV59394 I 0.960
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I 0.822
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I 0.822
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I 0.822
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I 0.822
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I 0.822
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I 0.822
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I 0.822
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I 0.820
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I 0.820
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I 0.822
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I 0.822
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I 0.822
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I 0.822
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I 0.820
ENSP00000357979 Macaca fascicularis ENSP00000357979 I 0.822
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I 0.822
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I 0.820
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I 0.822
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I 0.822
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I 0.822
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I 0.822
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I 0.820
EVEC_0000945501 Enterobius vermicularis EVEC_0000945501 I 0.762
e_gw.333.48.1 Branchiostoma floridae e_gw.333.48.1 I 0.985
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I 0.823
GA21482 Drosophila pseudoobscura FBgn0081468 I 0.767
GB50458 Apis mellifera GB50458 I 0.782
GB52015 Apis mellifera GB52015 I 0.944
GD23369 Drosophila simulans FBgn0194755 I 0.767
GE25723 Drosophila yakuba FBgn0242781 I 0.767
GF15588 Drosophila ananassae FBgn0092613 I 0.767
Gfo_R016106 Geospiza fortis Gfo_R016106 I 0.784
GG25103 Drosophila erecta FBgn0117232 I 0.767
GH11011 Drosophila grimshawi FBgn0118492 I 0.767
GI17531 Drosophila mojavensis FBgn0140275 I 0.767
GJ15408 Drosophila virilis FBgn0202602 I 0.767
GK14705 Drosophila willistoni FBgn0216711 I 0.767
GL19043 Drosophila persimilis FBgn0156644 I 0.767
GM18579 Drosophila sechellia FBgn0173485 I 0.767
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I 0.823
Hba_13386 Heterorhabditis bacteriophora Hba_13386 I 0.965
HCOI00499200 Haemonchus contortus HCOI00499200 I 0.789
HCOI00563400 Haemonchus contortus HCOI00563400 I 0.789
HelroG148449 Helobdella robusta HelroG148449 I 0.949
HelroG190681 Helobdella robusta HelroG190681 I 0.955
HelroG194580 Helobdella robusta HelroG194580 I 0.773
HelroG81672 Helobdella robusta HelroG81672 I 0.754
HHAL003045-PA Halyomorpha halys HHAL003045-PA I 0.770
HMEL013397 Heliconius melpomene HMEL013397 I 0.950
HPLM_0000273901 Haemonchus placei HPLM_0000273901 I 0.789
Hsal_03554--XP_624042.1_APIME Harpegnathos saltator Hsal_03554--XP_624042.1_APIME I 0.960
Hsal_12124--XP_624265.2_APIME Harpegnathos saltator Hsal_12124--XP_624265.2_APIME I 0.797
ISCW009256 Ixodes scapularis ISCW009256 I 0.956
KGM_01261 Danaus plexippus KGM_01261 I 0.787
KGM_02557 Danaus plexippus KGM_02557 I 0.958
KGM_12726 Danaus plexippus KGM_12726 I 0.787
L798_02901 Zootermopsis nevadensis L798_02901 I 0.959
LCUP005636 Lucilia cuprina LCUP005636 I 0.767
LDEC002297 Leptinotarsa decemlineata LDEC002297 I 0.960
LDEC003555 Leptinotarsa decemlineata LDEC003555 I 0.792
LLOJ008560 Lutzomyia longipalpis LLOJ008560 I 0.787
LotgiG120392 Lottia gigantea LotgiG120392 I 0.976
LotgiG135497 Lottia gigantea LotgiG135497 I 0.769
maker-nMf.1.1.scaf06872-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06872-augustus-gene-0.3 N 0.914
MCINX005281 Melitaea cinxia MCINX005281 I 0.787
MDOA002279 Musca domestica MDOA002279 I 0.773
MESCA004444 Megaselia scalaris MESCA004444 I 0.769
MhA1_Contig1097.frz3.gene5 Meloidogyne hapla MhA1_Contig1097.frz3.gene5 N 0.956
Minc02801 Meloidogyne incognita Minc02801 N 0.926
nAv.1.0.1.g01027 Acanthocheilonema viteae nAv.1.0.1.g01027 I 0.753
nAv.1.0.1.g01655 Acanthocheilonema viteae nAv.1.0.1.g01655 I 0.972
NBR_0002150401 Nippostrongylus brasiliensis NBR_0002150401 I 0.789
nDi.2.2.2.g01137 Dirofilaria immitis nDi.2.2.2.g01137 I 0.970
nDi.2.2.2.g02808 Dirofilaria immitis nDi.2.2.2.g02808 I 0.753
NEMVEDRAFT_v1g114090 Nematostella vectensis NEMVEDRAFT_v1g114090 I 0.780
NEMVEDRAFT_v1g132075 Nematostella vectensis NEMVEDRAFT_v1g132075 I 0.980
NEMVEDRAFT_v1g169225 Nematostella vectensis NEMVEDRAFT_v1g169225 I 0.804
NEMVEDRAFT_v1g99425 Nematostella vectensis NEMVEDRAFT_v1g99425 I 0.970
nhr-236 Caenorhabditis elegans WBGene00021417 I 0.969
nOo.2.0.1.g00175 Onchocerca ochengi nOo.2.0.1.g00175 I 0.753
nOo.2.0.1.g04609 Onchocerca ochengi nOo.2.0.1.g04609 I 0.851
NR2E1 Anolis carolinensis ENSACAG00000005957 I 0.822
NR2E1 Monodelphis domestica ENSMODG00000018005 I 0.822
NR2E1 Macaca mulatta ENSMMUG00000023767 I 0.822
Nr2e1 Mus musculus ENSMUSG00000019803 D 0.822
NR2E1 Myotis lucifugus ENSMLUG00000005543 I 0.822
NR2E1 Bos taurus ENSBTAG00000013991 I 0.822
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I 0.822
NR2E1 Loxodonta africana ENSLAFG00000013583 I 0.822
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I 0.822
NR2E1 Felis catus ENSFCAG00000002255 I 0.822
NR2E1 Equus caballus ENSECAG00000018990 I 0.822
NR2E1 Homo sapiens ENSG00000112333 D 0.822
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I 0.820
NR2E1 Gallus gallus ENSGALG00000015305 I 0.822
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I 0.822
nr2e1 Danio rerio ENSDARG00000017107 I 0.818
NR2E1 Cavia porcellus ENSCPOG00000000097 I 0.822
NR2E1 Callithrix jacchus ENSCJAG00000005966 I 0.822
NR2E1 Canis familiaris ENSCAFG00000003761 I 0.822
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I 0.822
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I 0.822
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I 0.820
nr2e1 Takifugu rubripes ENSTRUG00000001893 I 0.820
NR2E1 Tursiops truncatus ENSTTRG00000008863 I 0.822
NR2E1 Sus scrofa ENSSSCG00000004384 I 0.822
nr2e1 Xenopus tropicalis XB-GENE-483554 I 0.825
NR2E1 Sorex araneus ENSSARG00000013555 I 0.822
NR2E1 Tupaia belangeri ENSTBEG00000011676 I 0.822
NR2E1 Otolemur garnettii ENSOGAG00000011992 I 0.822
nr2e1 Oryzias latipes ENSORLG00000013426 I 0.820
NR2E1 Pan troglodytes ENSPTRG00000018472 I 0.822
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I 0.822
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I 0.822
nr2e1.S Xenopus laevis XB-GENE-864991 I 0.825
NV17364 Nasonia vitripennis NV17364 I 0.968
Ocbimv22038770m.g Octopus bimaculoides Ocbimv22038770m.g I 0.983
OFLC_0001242901 Onchocerca flexuosa OFLC_0001242901 I 0.753
Ogr18563 Ophisaurus gracilis Ogr18563 I 0.822
PHUM494010 Pediculus humanus PHUM494010 I 0.958
PHUM596250 Pediculus humanus PHUM596250 I 0.769
PNRLIKE Aedes aegypti AAEL008043 I 0.969
PPA06908 Pristionchus pacificus PPA06908 I 0.960
PPAI008488 Phlebotomus papatasi PPAI008488 I 0.787
Pvit_18941 Pogona vitticeps Pvit_18941 I 0.822
PXEA_0002767701 Protopolystoma xenopodis PXEA_0002767701 I 0.956
RPRC009755 Rhodnius prolixus RPRC009755 I 0.952
RSKR_0000792200 Rhabditophanes kr3021 RSKR_0000792200 I 0.767
Sakowv30026672m.g Saccoglossus kowalevskii Sakowv30026672m.g I 0.816
Sakowv30030751m.g Saccoglossus kowalevskii Sakowv30030751m.g I 0.976
Sakowv30031927m.g Saccoglossus kowalevskii Sakowv30031927m.g I 0.871
scaffold431-EXSNAP2012.16 Pristionchus exspectatus scaffold431-EXSNAP2012.16 I 0.950
SINV14755 Solenopsis invicta SINV14755 I 0.944
Sjc_0074110 Schistosoma japonicum Sjc_0074110 I 0.755
SMAR005242 Strigamia maritima SMAR005242 I 0.948
Smp_150630 Schistosoma mansoni Smp_150630 I 0.755
SMRZ_0001026501 Schistosoma margrebowiei SMRZ_0001026501 I 0.755
SMTD_0001673901 Schistosoma mattheei SMTD_0001673901 I 0.755
SMU15015045 Schmidtea mediterranea SMU15015045 I 0.773
SMU15038277 Schmidtea mediterranea SMU15038277 I 0.980
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I 0.818
SPU_017375 Strongylocentrotus purpuratus SPU_017375 I 0.966
SPU_024486 Strongylocentrotus purpuratus SPU_024486 I 0.883
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I 0.818
TC001069 Tribolium castaneum TC001069 I 0.786
TC030676 Tribolium castaneum TC030676 I 0.960
TCLT_0000820901 Thelazia callipaeda TCLT_0000820901 I 0.753
TCNE_0000809801 Toxocara canis TCNE_0000809801 I 0.753
TCNE_0001744001 Toxocara canis TCNE_0001744001 I 0.977
TELCIR_04430 Teladorsagia circumcincta TELCIR_04430 I 0.789
tetur01g02690 Tetranychus urticae tetur01g02690 I 0.873
tetur03g02550 Tetranychus urticae tetur03g02550 I 0.947
TMUE_s0002021300 Trichuris muris TMUE_s0002021300 I 0.954
TTRE_0000264801 Trichuris trichiura TTRE_0000264801 I 0.947
WBGene00241769 Onchocerca volvulus WBGene00241769 I 0.753
WUBG_07942 Wuchereria bancrofti WUBG_07942 N 0.839
WUBG_10076 Wuchereria bancrofti WUBG_10076 I 0.753
XP_002154441.1 Hydra magnipapillata XP_002154441.1 N 0.927
XP_002156561.1 Hydra magnipapillata XP_002156561.1 I 0.907
YQE_08225 Dendroctonus ponderosae YQE_08225 I 0.960
YQE_10677 Dendroctonus ponderosae YQE_10677 I 0.786