CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Hba_07236
(
Heterorhabditis bacteriophora
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Hba_07236
T308723_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-5
M00688_2.00
Caenorhabditis elegans
NNRWGTACRSNN
NNSYGTACWYNN
PBM
Narasimhan et al.(2015)
pTH10042
0.745
0.724
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hba_07236
Nuclear receptor
1
58
MHYGAIACVGCKGFFRRALMKADQLECQAHGNCPISVDQRTSCRSCRFQKCLYAGMKP
Links
Other
Nuclear receptor
family TFs
Other
Heterorhabditis bacteriophora
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NECAME_16756
Necator americanus
NECAME_16756
I
0.880
ANCCEY_03917
Ancylostoma ceylanicum
ANCCEY_03917
I
0.880
HCOI00626200
Haemonchus contortus
HCOI00626200
I
0.880
DICVIV_13591
Dictyocaulus viviparus
DICVIV_13591
N
0.768
DICVIV_13289
Dictyocaulus viviparus
DICVIV_13289
N
0.759
nhr-5
Caenorhabditis elegans
WBGene00003604
D
0.745