CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCOI00435200
(
Haemonchus contortus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HCOI00435200
T308771_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.988
0.943
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.754
0.614
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HCOI00435200.t1
Nuclear receptor
8
78
RKCAVCGDSPAKVHYGVLACFGCKGFFRRAVKDGRNKYVCRFEKNCEVNKFERNACRYCRFRKCLLVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Haemonchus contortus
TFs
145 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG06052
Caenorhabditis briggsae
CBG06052
I
0.988
nhr-7
Caenorhabditis elegans
WBGene00003606
D
0.988
CBN26258
Caenorhabditis brenneri
CBN26258
I
0.987
CBN18797
Caenorhabditis brenneri
CBN18797
I
0.987
CRE12779
Caenorhabditis remanei
CRE12779
I
0.987
ACAC_0000409401
Angiostrongylus cantonensis
ACAC_0000409401
I
0.985
ANCCEY_05105
Ancylostoma ceylanicum
ANCCEY_05105
I
0.984
SMUV_0000859101
Syphacia muris
SMUV_0000859101
I
0.983
BXY_0008800
Bursaphelenchus xylophilus
BXY_0008800
I
0.983
PEQ_0000633601
Parascaris equorum
PEQ_0000633601
I
0.982
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
0.982
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
0.982
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
0.982
L898_g24498
Steinernema monticolum
L898_g24498
I
0.981
L893_g29388
Steinernema glaseri
L893_g29388
I
0.981
L596_g20569
Steinernema carpocapsae
L596_g20569
I
0.981
L889_g5777
Steinernema feltiae
L889_g5777
I
0.979
PTRK_0000497300
Parastrongyloides trichosuri
PTRK_0000497300
I
0.977
ASIM_0001301101
Anisakis simplex
ASIM_0001301101
I
0.950
ASU_01199
Ascaris suum
ASU_01199
I
0.948
NBR_0001013301
Nippostrongylus brasiliensis
NBR_0001013301
I
0.943
PTRK_0000510500
Parastrongyloides trichosuri
PTRK_0000510500
I
0.923
SSTP_0000831700
Strongyloides stercoralis
SSTP_0000831700
I
0.923
SVE_0301400
Strongyloides venezuelensis
SVE_0301400
I
0.923
SPAL_0001436300
Strongyloides papillosus
SPAL_0001436300
I
0.923
BXY_1600300
Bursaphelenchus xylophilus
BXY_1600300
I
0.918
genemark-nMf.1.1.scaf00140-processed-gene-0.6
Meloidogyne floridensis
genemark-nMf.1.1.scaf00140-processed-gene-0.6
I
0.903
DME_0000188101
Dracunculus medinensis
DME_0000188101
I
0.899
CBN31048
Caenorhabditis brenneri
CBN31048
I
0.897
CBG19594
Caenorhabditis briggsae
CBG19594
I
0.897
CRE06661
Caenorhabditis remanei
CRE06661
I
0.897
MhA1_Contig984.frz3.gene20
Meloidogyne hapla
MhA1_Contig984.frz3.gene20
I
0.896
GPLIN_000268400
Globodera pallida
GPLIN_000268400
I
0.896
Hba_14958
Heterorhabditis bacteriophora
Hba_14958
I
0.895
HCOI00769300
Haemonchus contortus
HCOI00769300
I
0.895
DICVIV_02348
Dictyocaulus viviparus
DICVIV_02348
I
0.895
HPBE_0001043101
Heligmosomoides bakeri
HPBE_0001043101
I
0.895
HCOI01406200
Haemonchus contortus
HCOI01406200
I
0.895
HPLM_0001680701
Haemonchus placei
HPLM_0001680701
I
0.895
NECAME_12696
Necator americanus
NECAME_12696
I
0.895
OESDEN_02652
Oesophagostomum dentatum
OESDEN_02652
I
0.895
ANCCEY_03357
Ancylostoma ceylanicum
ANCCEY_03357
I
0.895
ACAC_0000239001
Angiostrongylus cantonensis
ACAC_0000239001
I
0.895
TELCIR_07363
Teladorsagia circumcincta
TELCIR_07363
I
0.895
ACOC_0001326501
Angiostrongylus costaricensis
ACOC_0001326501
I
0.895
TELCIR_05080
Teladorsagia circumcincta
TELCIR_05080
I
0.895
ASIM_0001309901
Anisakis simplex
ASIM_0001309901
I
0.891
CJA08328
Caenorhabditis japonica
CJA08328
I
0.887
CRE02711
Caenorhabditis remanei
CRE02711
I
0.887
CRE10161
Caenorhabditis remanei
CRE10161
I
0.887
nhr-31
Caenorhabditis elegans
WBGene00003625
I
0.887
HCOI01716000
Haemonchus contortus
HCOI01716000
I
0.884
HPLM_0001092501
Haemonchus placei
HPLM_0001092501
I
0.884
PTRK_0000207700
Parastrongyloides trichosuri
PTRK_0000207700
I
0.884
NBR_0001013001
Nippostrongylus brasiliensis
NBR_0001013001
I
0.884
DICVIV_10822
Dictyocaulus viviparus
DICVIV_10822
I
0.884
OESDEN_12257
Oesophagostomum dentatum
OESDEN_12257
I
0.884
ANCCAN_03474
Ancylostoma caninum
ANCCAN_03474
I
0.884
LOAG_01074
Loa loa
LOAG_01074
I
0.881
ASU_04305
Ascaris suum
ASU_04305
I
0.881
Bm2389
Brugia malayi
Bm2389
I
0.881
L889_g8361
Steinernema feltiae
L889_g8361
I
0.880
L898_g10316
Steinernema monticolum
L898_g10316
I
0.879
L596_g25297
Steinernema carpocapsae
L596_g25297
I
0.879
scaffold601-EXSNAP2012.19
Pristionchus exspectatus
scaffold601-EXSNAP2012.19
I
0.877
Ppa-nhr-31
Pristionchus pacificus
PPA24219
I
0.877
Hba_06510
Heterorhabditis bacteriophora
Hba_06510
I
0.877
EVEC_0000349901
Enterobius vermicularis
EVEC_0000349901
I
0.877
CBN13729
Caenorhabditis brenneri
CBN13729
I
0.875
L596_g3812
Steinernema carpocapsae
L596_g3812
I
0.875
L893_g27196
Steinernema glaseri
L893_g27196
I
0.875
L889_g6303
Steinernema feltiae
L889_g6303
I
0.875
L898_g23965
Steinernema monticolum
L898_g23965
I
0.873
nDi.2.2.2.g03563
Dirofilaria immitis
nDi.2.2.2.g03563
I
0.872
L892_g21738
Steinernema scapterisci
L892_g21738
I
0.872
SVE_1965700
Strongyloides venezuelensis
SVE_1965700
I
0.871
PPA21285
Pristionchus pacificus
PPA21285
I
0.871
SSTP_0000662400
Strongyloides stercoralis
SSTP_0000662400
I
0.871
scaffold51-EXSNAP2012.23
Pristionchus exspectatus
scaffold51-EXSNAP2012.23
I
0.871
BXY_0740100
Bursaphelenchus xylophilus
BXY_0740100
I
0.871
SPAL_0000620000
Strongyloides papillosus
SPAL_0000620000
I
0.871
nhr-119
Caenorhabditis elegans
WBGene00003709
I
0.867
NBR_0001432001
Nippostrongylus brasiliensis
NBR_0001432001
I
0.867
RSKR_0000811500
Rhabditophanes kr3021
RSKR_0000811500
I
0.866
WBGene00241236
Onchocerca volvulus
WBGene00241236
I
0.856
SMUV_0000212501
Syphacia muris
SMUV_0000212501
I
0.852
NBR_0000170601
Nippostrongylus brasiliensis
NBR_0000170601
I
0.852
HCOI01268300
Haemonchus contortus
HCOI01268300
I
0.852
EVEC_0001115901
Enterobius vermicularis
EVEC_0001115901
I
0.852
L893_g6878
Steinernema glaseri
L893_g6878
I
0.851
RSKR_0000832300
Rhabditophanes kr3021
RSKR_0000832300
I
0.849
DME_0000742401
Dracunculus medinensis
DME_0000742401
I
0.848
CBG17744
Caenorhabditis briggsae
CBG17744
I
0.845
CBG19604
Caenorhabditis briggsae
CBG19604
I
0.840
CJA04720
Caenorhabditis japonica
CJA04720
I
0.840
nhr-88
Caenorhabditis elegans
WBGene00003678
I
0.837
CRE06667
Caenorhabditis remanei
CRE06667
I
0.837
CBN20828
Caenorhabditis brenneri
CBN20828
I
0.837
CBN07936
Caenorhabditis brenneri
CBN07936
I
0.837
L596_g3809
Steinernema carpocapsae
L596_g3809
I
0.835
L898_g2799
Steinernema monticolum
L898_g2799
I
0.835
L889_g8621
Steinernema feltiae
L889_g8621
I
0.835
L893_g27201
Steinernema glaseri
L893_g27201
I
0.835
BXY_1595900
Bursaphelenchus xylophilus
BXY_1595900
I
0.833
L893_g32432
Steinernema glaseri
L893_g32432
I
0.831
GPLIN_001106000
Globodera pallida
GPLIN_001106000
I
0.828
ACAC_0001180201
Angiostrongylus cantonensis
ACAC_0001180201
I
0.817
L596_g27086
Steinernema carpocapsae
L596_g27086
I
0.816
PTRK_0000775900
Parastrongyloides trichosuri
PTRK_0000775900
I
0.814
ANCCAN_12539
Ancylostoma caninum
ANCCAN_12539
I
0.814
L898_g4801
Steinernema monticolum
L898_g4801
I
0.814
OESDEN_17109
Oesophagostomum dentatum
OESDEN_17109
I
0.814
SPAL_0001157400
Strongyloides papillosus
SPAL_0001157400
I
0.814
L889_g29204
Steinernema feltiae
L889_g29204
I
0.814
NECAME_05125
Necator americanus
NECAME_05125
I
0.814
SSTP_0000217700
Strongyloides stercoralis
SSTP_0000217700
I
0.814
SVE_1633700
Strongyloides venezuelensis
SVE_1633700
I
0.814
Hba_14163
Heterorhabditis bacteriophora
Hba_14163
I
0.814
Minc15420
Meloidogyne incognita
Minc15420
I
0.807
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf24311-processed-gene-0.3
I
0.807
TCLT_0000173501
Thelazia callipaeda
TCLT_0000173501
I
0.800
WBGene00248075
Onchocerca volvulus
WBGene00248075
I
0.800
LOAG_05485
Loa loa
LOAG_05485
I
0.800
OFLC_0001511801
Onchocerca flexuosa
OFLC_0001511801
I
0.800
nDi.2.2.2.g02781
Dirofilaria immitis
nDi.2.2.2.g02781
I
0.800
nLs.2.1.2.g08709
Litomosoides sigmodontis
nLs.2.1.2.g08709
I
0.800
nAv.1.0.1.g01698
Acanthocheilonema viteae
nAv.1.0.1.g01698
I
0.800
GPUH_0000393501
Gongylonema pulchrum
GPUH_0000393501
I
0.800
WUBG_10752
Wuchereria bancrofti
WUBG_10752
I
0.800
nOo.2.0.1.g04046
Onchocerca ochengi
nOo.2.0.1.g04046
I
0.800
Bm12053
Brugia malayi
Bm12053
I
0.800
BTMF_0001198801
Brugia timori
BTMF_0001198801
I
0.800
Bm4894
Brugia malayi
Bm4894
I
0.800
DME_0000960901
Dracunculus medinensis
DME_0000960901
I
0.799
ANCCAN_03471
Ancylostoma caninum
ANCCAN_03471
I
0.798
scaffold601-EXSNAP2012.18
Pristionchus exspectatus
scaffold601-EXSNAP2012.18
N
0.796
DICVIV_11945
Dictyocaulus viviparus
DICVIV_11945
I
0.786
TCNE_0001063401
Toxocara canis
TCNE_0001063401
N
0.765
CBN19233
Caenorhabditis brenneri
CBN19233
I
0.759
ASIM_0001589901
Anisakis simplex
ASIM_0001589901
I
0.758
CRE15289
Caenorhabditis remanei
CRE15289
I
0.754
nhr-3
Caenorhabditis elegans
WBGene00003602
D
0.754
CBG07552
Caenorhabditis briggsae
CBG07552
I
0.754
ANCDUO_11035
Ancylostoma duodenale
ANCDUO_11035
I
0.748
nLs.2.1.2.g05858
Litomosoides sigmodontis
nLs.2.1.2.g05858
I
0.746