HCOI00592600 (Haemonchus contortus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HCOI00592600 T308779_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.909 0.571
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.859 0.457
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00592600.t1 Nuclear receptor 28 97
HCOI00592600.t2 Nuclear receptor 28 97

Links

Other Nuclear receptor family TFs
Other Haemonchus contortus TFs

Invalid Input OrderBy

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action