HCOI01526000 (Haemonchus contortus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HCOI01526000 T308798_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.894 0.671
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.786 0.757
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.786 0.757
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI01526000.t1 Nuclear receptor 67 136
HCOI01526000.t2 Nuclear receptor 67 136

Links

Other Nuclear receptor family TFs
Other Haemonchus contortus TFs

Invalid Input OrderBy

128 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action