HPBE_0000614401 (Heligmosomoides bakeri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPBE_0000614401 T308856_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-6
M01298_2.00
Caenorhabditis elegans
AAAKGTCA

TGACMTTT
PBM
Lambert et al.(2019)
pTH9944
0.875 0.817
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0000614401-mRNA-1 Nuclear receptor 27 86

Links

Other Nuclear receptor family TFs
Other Heligmosomoides bakeri TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_17310 Ancylostoma caninum ANCCAN_17310 I 0.931
ACOC_0000820101 Angiostrongylus costaricensis ACOC_0000820101 I 0.931
ANCCAN_19537 Ancylostoma caninum ANCCAN_19537 I 0.931
ANCCEY_02644 Ancylostoma ceylanicum ANCCEY_02644 I 0.931
NECAME_08630 Necator americanus NECAME_08630 I 0.931
OESDEN_19374 Oesophagostomum dentatum OESDEN_19374 I 0.931
OESDEN_20790 Oesophagostomum dentatum OESDEN_20790 I 0.931
ACAC_0001002301 Angiostrongylus cantonensis ACAC_0001002301 I 0.931
HPLM_0001586101 Haemonchus placei HPLM_0001586101 I 0.916
CBG09761 Caenorhabditis briggsae CBG09761 I 0.886
CRE25157 Caenorhabditis remanei CRE25157 I 0.886
CBN30153 Caenorhabditis brenneri CBN30153 I 0.884
nhr-6 Caenorhabditis elegans WBGene00003605 D 0.875
CJA17947 Caenorhabditis japonica CJA17947 I 0.868
nAv.1.0.1.g08063 Acanthocheilonema viteae nAv.1.0.1.g08063 I 0.864
nDi.2.2.2.g00399 Dirofilaria immitis nDi.2.2.2.g00399 I 0.864
TCLT_0000786401 Thelazia callipaeda TCLT_0000786401 I 0.864
nOo.2.0.1.g04938 Onchocerca ochengi nOo.2.0.1.g04938 I 0.864
OFLC_0000146601 Onchocerca flexuosa OFLC_0000146601 I 0.864
nLs.2.1.2.g03281 Litomosoides sigmodontis nLs.2.1.2.g03281 I 0.864
EVEC_0001196201 Enterobius vermicularis EVEC_0001196201 I 0.864
ASIM_0002132801 Anisakis simplex ASIM_0002132801 I 0.864
LOAG_17747 Loa loa LOAG_17747 I 0.864
Bm2835 Brugia malayi Bm2835 I 0.864
ASU_00227 Ascaris suum ASU_00227 I 0.864
WBGene00245009 Onchocerca volvulus WBGene00245009 I 0.864
WUBG_14756 Wuchereria bancrofti WUBG_14756 I 0.864
SMUV_0000145601 Syphacia muris SMUV_0000145601 I 0.856
SVE_1805600 Strongyloides venezuelensis SVE_1805600 I 0.771
SSTP_0000178800 Strongyloides stercoralis SSTP_0000178800 I 0.771
SPAL_0001682500 Strongyloides papillosus SPAL_0001682500 I 0.771
PTRK_0000716700 Parastrongyloides trichosuri PTRK_0000716700 I 0.771
MhA1_Contig1683.frz3.gene3 Meloidogyne hapla MhA1_Contig1683.frz3.gene3 I 0.755
BXY_0301100 Bursaphelenchus xylophilus BXY_0301100 I 0.752
maker-nMf.1.1.scaf09604-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf09604-augustus-gene-0.3 I 0.750