HPBE_0002060301 (Heligmosomoides bakeri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPBE_0002060301 T308879_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.769 0.667
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.769 0.667
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.760 0.580
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0002060301-mRNA-1 Nuclear receptor 9 77

Links

Other Nuclear receptor family TFs
Other Heligmosomoides bakeri TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB008395 Anopheles albimanus AALB008395 I 0.755
AARA011580 Anopheles arabiensis AARA011580 I 0.753
AATE006049 Anopheles atroparvus AATE006049 I 0.749
ACEP16468 Atta cephalotes ACEP16468 I 0.761
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.769
ACOM033140 Anopheles coluzzii ACOM033140 I 0.753
ACUA008166 Anopheles culicifacies ACUA008166 I 0.753
ADAC003041 Anopheles darlingi ADAC003041 I 0.755
ADIR005534 Anopheles dirus ADIR005534 I 0.753
AEPI000232 Anopheles epiroticus AEPI000232 I 0.749
AFAF019254 Anopheles farauti AFAF019254 I 0.760
AFUN010189 Anopheles funestus AFUN010189 I 0.753
AGAP004224 Anopheles gambiae AGAP004224 I 0.753
AMAM022585 Anopheles maculatus AMAM022585 I 0.753
AMEC016766 Anopheles melas AMEC016766 I 0.753
AMEM008752 Anopheles merus AMEM008752 I 0.753
AMIN004130 Anopheles minimus AMIN004130 I 0.753
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.769
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I 0.986
ANCCEY_01199 Ancylostoma ceylanicum ANCCEY_01199 I 0.783
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.769
AQUA008824 Anopheles quadriannulatus AQUA008824 I 0.753
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.772
ASIS011648 Anopheles sinensis ASIS011648 I 0.749
ASTEI03690 Anopheles stephensi ASTEI03690 I 0.753
ASU_07898 Ascaris suum ASU_07898 I 0.772
BGIBMGA010782 Bombyx mori BGIBMGA010782 I 0.764
Bm3787 Brugia malayi Bm3787 I 0.833
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.772
CBG04512 Caenorhabditis briggsae CBG04512 I 0.769
CBG05944 Caenorhabditis briggsae CBG05944 I 0.973
CBN22467 Caenorhabditis brenneri CBN22467 N 0.760
CBN28114 Caenorhabditis brenneri CBN28114 N 0.967
CBN31767 Caenorhabditis brenneri CBN31767 I 0.769
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I 0.765
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I 0.985
CJA11532 Caenorhabditis japonica CJA11532 I 0.769
CJA16298 Caenorhabditis japonica CJA16298 N 0.974
CRE05362 Caenorhabditis remanei CRE05362 I 0.974
CRE07237 Caenorhabditis remanei CRE07237 I 0.769
CRE12534 Caenorhabditis remanei CRE12534 I 0.974
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I 0.810
DICVIV_13314 Dictyocaulus viviparus DICVIV_13314 N 0.958
DICVIV_13447 Dictyocaulus viviparus DICVIV_13447 N 0.961
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.772
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I 0.833
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I 0.783
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.772
Hr96 Drosophila melanogaster FBgn0015240 D 0.760
Hr96 Drosophila grimshawi FBgn0020174 I 0.760
GA11197 Drosophila pseudoobscura FBgn0071252 I 0.760
GF16320 Drosophila ananassae FBgn0093341 I 0.760
GG11347 Drosophila erecta FBgn0103647 I 0.760
GI22223 Drosophila mojavensis FBgn0144951 I 0.760
GM17786 Drosophila sechellia FBgn0172693 I 0.760
GD21158 Drosophila simulans FBgn0192609 I 0.760
GJ24344 Drosophila virilis FBgn0211424 I 0.760
GK14276 Drosophila willistoni FBgn0216282 I 0.750
GE23543 Drosophila yakuba FBgn0240719 I 0.760
GB52904 Apis mellifera GB52904 I 0.765
HCOI00283900 Haemonchus contortus HCOI00283900 I 0.979
HCOI00567800 Haemonchus contortus HCOI00567800 I 0.978
HHAL000201-PA Halyomorpha halys HHAL000201-PA I 0.754
HMEL016865 Heliconius melpomene HMEL016865 I 0.764
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I 0.765
ISCW009328 Ixodes scapularis ISCW009328 I 0.825
KGM_05575 Danaus plexippus KGM_05575 I 0.764
L596_g25556 Steinernema carpocapsae L596_g25556 I 0.861
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.772
L798_15710 Zootermopsis nevadensis L798_15710 I 0.839
L889_g10853 Steinernema feltiae L889_g10853 I 0.772
L889_g7248 Steinernema feltiae L889_g7248 I 0.795
L892_g14860 Steinernema scapterisci L892_g14860 I 0.837
L892_g18386 Steinernema scapterisci L892_g18386 I 0.779
L893_g3995 Steinernema glaseri L893_g3995 I 0.830
L898_g10498 Steinernema monticolum L898_g10498 I 0.772
L898_g23217 Steinernema monticolum L898_g23217 I 0.792
LCUP002913 Lucilia cuprina LCUP002913 I 0.760
LDEC005794 Leptinotarsa decemlineata LDEC005794 I 0.762
LOAG_10538 Loa loa LOAG_10538 I 0.772
MDOA002084 Musca domestica MDOA002084 I 0.760
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I 0.827
nDi.2.2.2.g04518 Dirofilaria immitis nDi.2.2.2.g04518 I 0.785
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.772
NV10187 Nasonia vitripennis NV10187 I 0.765
Ppa-nhr-8 Pristionchus pacificus PPA17111 I 0.760
PPAI005921 Phlebotomus papatasi PPAI005921 I 0.767
PTRK_0000134600 Parastrongyloides trichosuri PTRK_0000134600 N 0.749
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.772
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.769
scaffold889-EXSNAP2012.10 Pristionchus exspectatus scaffold889-EXSNAP2012.10 I 0.764
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.772
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.772
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.772
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.772
TC010645 Tribolium castaneum TC010645 I 0.754
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.772
TELCIR_04193 Teladorsagia circumcincta TELCIR_04193 I 0.987
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.769
tetur17g03630 Tetranychus urticae tetur17g03630 I 0.783
tetur34g00750 Tetranychus urticae tetur34g00750 I 0.805
daf-12 Caenorhabditis elegans WBGene00000908 D 0.769
nhr-8 Caenorhabditis elegans WBGene00003607 I 0.973
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.772
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.772
WUBG_13334 Wuchereria bancrofti WUBG_13334 I 0.833
nr1i3 Xenopus tropicalis XB-GENE-479859 I 0.780
YQE_04331 Dendroctonus ponderosae YQE_04331 I 0.781