CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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HPBE_0002627401
(
Heligmosomoides bakeri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
HPBE_0002627401
T308882_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0002627401-mRNA-1
Nuclear receptor
18
63
VPCQVCGDRSYGRHYGQWTCDGCSCFFKRSIRRSIIYTCICTLFST
Links
Other
Nuclear receptor
family TFs
Other
Heligmosomoides bakeri
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPLM_0002159101
Haemonchus placei
HPLM_0002159101
I
0.826
ACAC_0001082701
Angiostrongylus cantonensis
ACAC_0001082701
I
0.818
ACOC_0001282001
Angiostrongylus costaricensis
ACOC_0001282001
I
0.818
ISCW008659
Ixodes scapularis
ISCW008659
I
0.773
NV10871
Nasonia vitripennis
NV10871
I
0.763
L596_g19535
Steinernema carpocapsae
L596_g19535
N
0.759
L892_g29081
Steinernema scapterisci
L892_g29081
N
0.758
L889_g32531
Steinernema feltiae
L889_g32531
I
0.758