HPLM_0000769401 (Haemonchus placei)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 HPLM_0000769401 T308895_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.936 0.586
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.894 0.614
nhr-154
M00698_2.00
Caenorhabditis elegans
NRBRYCAHWD

HWDTGRYVYN
PBM
Narasimhan et al.(2015)
pTH10650
0.884 0.614
CBG23380
M01296_2.00
Caenorhabditis briggsae
NDBDHHANWN

NWNTDDHVHN
PBM
Lambert et al.(2019)
pTH11449
0.881 0.600
nhr-204
M00704_2.00
Caenorhabditis elegans
NDNTGRTMHN

NDKAYCANHN
PBM
Narasimhan et al.(2015)
pTH10028
0.856 0.529
CBG26996_CONSTRUCT
M01300_2.00
PBM CONSTRUCTS
NNNNTGRWMN

NKWYCANNNN
PBM
Lambert et al.(2019)
pTH11460
0.800 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HPLM_0000769401-mRNA-1 Nuclear receptor 24 93

Links

Other Nuclear receptor family TFs
Other Haemonchus placei TFs

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241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action