L889_g304 (Steinernema feltiae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L889_g304 T309106_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-46
M00692_2.00
Caenorhabditis elegans
NNNDWNHRN

NYDNWHNNN
PBM
Narasimhan et al.(2015)
pTH9924
0.918 0.714
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g304.t1 Nuclear receptor 67 137
L889_g304.t2 Nuclear receptor 67 137
L889_g304.t3 Nuclear receptor 121 191

Links

Other Nuclear receptor family TFs
Other Steinernema feltiae TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCAN_22589 Ancylostoma caninum ANCCAN_22589 I 0.982
CBN08077 Caenorhabditis brenneri CBN08077 I 0.917
CBN16259 Caenorhabditis brenneri CBN16259 I 0.917
CBG19870 Caenorhabditis briggsae CBG19870 I 0.917
nhr-46 Caenorhabditis elegans WBGene00003636 D 0.918
CJA19491 Caenorhabditis japonica CJA19491 I 0.917
CRE28659 Caenorhabditis remanei CRE28659 I 0.917
CRE30546 Caenorhabditis remanei CRE30546 I 0.917
scaffold303-EXSNAP2012.4 Pristionchus exspectatus scaffold303-EXSNAP2012.4 I 0.797
scaffold19-EXSNAP2012.26 Pristionchus exspectatus scaffold19-EXSNAP2012.26 I 0.815
scaffold731-EXSNAP2012.1 Pristionchus exspectatus scaffold731-EXSNAP2012.1 I 0.846
PPA17263 Pristionchus pacificus PPA17263 I 0.846
L596_g14937 Steinernema carpocapsae L596_g14937 I 0.993
L893_g13425 Steinernema glaseri L893_g13425 I 0.993
L898_g30036 Steinernema monticolum L898_g30036 I 0.993
L892_g3686 Steinernema scapterisci L892_g3686 I 0.993