L889_g6798 (Steinernema feltiae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L889_g6798 T309135_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.836 0.507
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.818 0.552
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g6798.t1 Nuclear receptor 15 82

Links

Other Nuclear receptor family TFs
Other Steinernema feltiae TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L889_g6797 Steinernema feltiae L889_g6797 I 0.981
L889_g6799 Steinernema feltiae L889_g6799 I 0.975
L898_g19019 Steinernema monticolum L898_g19019 I 0.967
L898_g4013 Steinernema monticolum L898_g4013 I 0.909
L893_g18993 Steinernema glaseri L893_g18993 I 0.907
L892_g14817 Steinernema scapterisci L892_g14817 I 0.905
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.901
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.901
L898_g19021 Steinernema monticolum L898_g19021 I 0.899
L898_g21763 Steinernema monticolum L898_g21763 I 0.884
L898_g19014 Steinernema monticolum L898_g19014 I 0.883
CBG15881 Caenorhabditis briggsae CBG15881 I 0.877
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.868
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.866
L892_g2782 Steinernema scapterisci L892_g2782 I 0.866
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.866
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.866
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.863
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.863
L898_g4012 Steinernema monticolum L898_g4012 I 0.860
L889_g6792 Steinernema feltiae L889_g6792 I 0.856
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.849
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.847
L892_g14818 Steinernema scapterisci L892_g14818 I 0.844
CBG09567 Caenorhabditis briggsae CBG09567 I 0.840
CRE05044 Caenorhabditis remanei CRE05044 I 0.839
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.836
L898_g4015 Steinernema monticolum L898_g4015 N 0.831
CRE30948 Caenorhabditis remanei CRE30948 I 0.827
L898_g2944 Steinernema monticolum L898_g2944 N 0.827
L898_g4014 Steinernema monticolum L898_g4014 N 0.823
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.823
L889_g8187 Steinernema feltiae L889_g8187 I 0.821
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.818
CJA28065 Caenorhabditis japonica CJA28065 I 0.809
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.808
CRE31070 Caenorhabditis remanei CRE31070 I 0.805
CBN28290 Caenorhabditis brenneri CBN28290 I 0.805
CBG09320 Caenorhabditis briggsae CBG09320 I 0.805
CBN21486 Caenorhabditis brenneri CBN21486 I 0.805
L898_g32142 Steinernema monticolum L898_g32142 N 0.800
L892_g10842 Steinernema scapterisci L892_g10842 I 0.800
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.800
L898_g2943 Steinernema monticolum L898_g2943 N 0.798
L898_g20180 Steinernema monticolum L898_g20180 I 0.795
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.794
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.792
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.792
L898_g4016 Steinernema monticolum L898_g4016 N 0.792
L898_g12799 Steinernema monticolum L898_g12799 I 0.788
L889_g8185 Steinernema feltiae L889_g8185 I 0.787
L596_g14541 Steinernema carpocapsae L596_g14541 N 0.784
L889_g6804 Steinernema feltiae L889_g6804 I 0.777
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.775
L898_g19012 Steinernema monticolum L898_g19012 I 0.771
L893_g27930 Steinernema glaseri L893_g27930 I 0.770
NBR_0001834801 Nippostrongylus brasiliensis NBR_0001834801 I 0.766
L893_g27935 Steinernema glaseri L893_g27935 N 0.764
L892_g14825 Steinernema scapterisci L892_g14825 I 0.761
L889_g6800 Steinernema feltiae L889_g6800 N 0.761
L892_g10840 Steinernema scapterisci L892_g10840 N 0.760
L892_g10843 Steinernema scapterisci L892_g10843 I 0.760
CRE08753 Caenorhabditis remanei CRE08753 I 0.759
L596_g14578 Steinernema carpocapsae L596_g14578 N 0.756
L889_g6803 Steinernema feltiae L889_g6803 N 0.753
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.752