L889_g6799 (Steinernema feltiae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L889_g6799 T309136_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-142
M00703_2.00 		Caenorhabditis elegans
RGTCACAR
YTGTGACY		 PBM
Narasimhan et al.(2015)
pTH10714 		0.814 0.522
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.783 0.478
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L889_g6799.t1 Nuclear receptor 15 84

Links

Other Nuclear receptor family TFs
Other Steinernema feltiae TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L889_g6798 Steinernema feltiae L889_g6798 I 0.975
L889_g6797 Steinernema feltiae L889_g6797 I 0.967
L898_g19019 Steinernema monticolum L898_g19019 I 0.965
L898_g21763 Steinernema monticolum L898_g21763 I 0.901
L898_g4013 Steinernema monticolum L898_g4013 I 0.895
L893_g18993 Steinernema glaseri L893_g18993 I 0.888
L892_g14817 Steinernema scapterisci L892_g14817 I 0.881
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.870
L892_g2782 Steinernema scapterisci L892_g2782 I 0.868
L898_g4012 Steinernema monticolum L898_g4012 I 0.859
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.857
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.857
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.849
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.849
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.849
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.847
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.846
L898_g19021 Steinernema monticolum L898_g19021 I 0.844
CBG15881 Caenorhabditis briggsae CBG15881 I 0.838
L898_g19014 Steinernema monticolum L898_g19014 I 0.837
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.824
CRE30948 Caenorhabditis remanei CRE30948 I 0.819
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.818
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.817
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.814
L889_g6792 Steinernema feltiae L889_g6792 I 0.807
CBG09320 Caenorhabditis briggsae CBG09320 I 0.802
CRE05044 Caenorhabditis remanei CRE05044 I 0.802
CRE31070 Caenorhabditis remanei CRE31070 I 0.802
CBN28290 Caenorhabditis brenneri CBN28290 I 0.802
CBN21486 Caenorhabditis brenneri CBN21486 I 0.802
L898_g4014 Steinernema monticolum L898_g4014 N 0.801
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.798
L892_g14818 Steinernema scapterisci L892_g14818 I 0.796
L889_g6804 Steinernema feltiae L889_g6804 I 0.791
CBG09567 Caenorhabditis briggsae CBG09567 I 0.788
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.785
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.783
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.783
L898_g4015 Steinernema monticolum L898_g4015 N 0.779
L893_g27930 Steinernema glaseri L893_g27930 I 0.779
L889_g8185 Steinernema feltiae L889_g8185 I 0.777
CJA28065 Caenorhabditis japonica CJA28065 I 0.776
SVUK_0001603001 Strongylus vulgaris SVUK_0001603001 I 0.769
L898_g2944 Steinernema monticolum L898_g2944 N 0.766
CRE08753 Caenorhabditis remanei CRE08753 I 0.765
L892_g10843 Steinernema scapterisci L892_g10843 I 0.760
L889_g8187 Steinernema feltiae L889_g8187 I 0.758
L898_g12799 Steinernema monticolum L898_g12799 I 0.757
L892_g10842 Steinernema scapterisci L892_g10842 I 0.753
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.753