CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g8185
(
Steinernema feltiae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L889_g8185
T309146_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN
NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.852
0.543
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g8185.t1
Nuclear receptor
30
100
LVCLVCAAEAHGIHFQVNSCRACAAFFRRSAQIASSYKCRRASKNCDVRKDSKFNCRYCRYQKCLRVGMLM
Links
Other
Nuclear receptor
family TFs
Other
Steinernema feltiae
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L898_g12799
Steinernema monticolum
L898_g12799
I
0.961
L889_g8187
Steinernema feltiae
L889_g8187
I
0.948
L898_g21763
Steinernema monticolum
L898_g21763
I
0.943
L889_g6804
Steinernema feltiae
L889_g6804
I
0.937
L893_g27930
Steinernema glaseri
L893_g27930
I
0.930
L892_g10843
Steinernema scapterisci
L892_g10843
I
0.923
L596_g14533
Steinernema carpocapsae
L596_g14533
I
0.922
L892_g10842
Steinernema scapterisci
L892_g10842
I
0.919
L898_g2943
Steinernema monticolum
L898_g2943
N
0.915
L596_g14596
Steinernema carpocapsae
L596_g14596
I
0.912
L596_g14532
Steinernema carpocapsae
L596_g14532
I
0.910
L893_g18993
Steinernema glaseri
L893_g18993
I
0.909
L898_g19014
Steinernema monticolum
L898_g19014
I
0.907
L889_g6695
Steinernema feltiae
L889_g6695
I
0.900
L898_g19012
Steinernema monticolum
L898_g19012
I
0.899
L889_g6803
Steinernema feltiae
L889_g6803
N
0.898
L889_g6692
Steinernema feltiae
L889_g6692
I
0.898
L898_g2944
Steinernema monticolum
L898_g2944
N
0.898
L893_g27935
Steinernema glaseri
L893_g27935
N
0.898
L893_g18992
Steinernema glaseri
L893_g18992
I
0.895
L892_g10840
Steinernema scapterisci
L892_g10840
N
0.894
L898_g4016
Steinernema monticolum
L898_g4016
N
0.893
L889_g6792
Steinernema feltiae
L889_g6792
I
0.893
L892_g2780
Steinernema scapterisci
L892_g2780
I
0.882
L898_g4012
Steinernema monticolum
L898_g4012
I
0.880
L898_g4015
Steinernema monticolum
L898_g4015
N
0.880
L596_g14589
Steinernema carpocapsae
L596_g14589
I
0.879
L596_g14578
Steinernema carpocapsae
L596_g14578
N
0.871
L596_g14541
Steinernema carpocapsae
L596_g14541
N
0.870
L898_g3515
Steinernema monticolum
L898_g3515
I
0.870
L898_g3514
Steinernema monticolum
L898_g3514
I
0.868
L892_g14818
Steinernema scapterisci
L892_g14818
I
0.863
L893_g27943
Steinernema glaseri
L893_g27943
N
0.860
CBG09567
Caenorhabditis briggsae
CBG09567
I
0.857
L889_g6806
Steinernema feltiae
L889_g6806
N
0.854
L889_g6694
Steinernema feltiae
L889_g6694
I
0.854
L596_g14536
Steinernema carpocapsae
L596_g14536
I
0.852
nhr-232
Caenorhabditis elegans
WBGene00012494
D
0.852
L892_g14817
Steinernema scapterisci
L892_g14817
I
0.848
L596_g14590
Steinernema carpocapsae
L596_g14590
I
0.847
L892_g2781
Steinernema scapterisci
L892_g2781
I
0.845
L898_g4018
Steinernema monticolum
L898_g4018
N
0.839
L892_g14825
Steinernema scapterisci
L892_g14825
I
0.836
L898_g3512
Steinernema monticolum
L898_g3512
I
0.835
HPBE_0001646201
Heligmosomoides bakeri
HPBE_0001646201
I
0.832
L596_g14537
Steinernema carpocapsae
L596_g14537
I
0.813
L892_g14824
Steinernema scapterisci
L892_g14824
N
0.802
L889_g6797
Steinernema feltiae
L889_g6797
I
0.797
scaffold31-EXSNAP2012.20
Pristionchus exspectatus
scaffold31-EXSNAP2012.20
I
0.794
CRE30948
Caenorhabditis remanei
CRE30948
I
0.793
L596_g14588
Steinernema carpocapsae
L596_g14588
I
0.791
L892_g2782
Steinernema scapterisci
L892_g2782
I
0.789
L889_g6798
Steinernema feltiae
L889_g6798
I
0.787
ANCCEY_07914
Ancylostoma ceylanicum
ANCCEY_07914
I
0.784
HPLM_0000974401
Haemonchus placei
HPLM_0000974401
I
0.782
L889_g6799
Steinernema feltiae
L889_g6799
I
0.777
L892_g14814
Steinernema scapterisci
L892_g14814
N
0.772
NBR_0001834801
Nippostrongylus brasiliensis
NBR_0001834801
I
0.771
L898_g19019
Steinernema monticolum
L898_g19019
I
0.766
HCOI01190000
Haemonchus contortus
HCOI01190000
I
0.764
HPLM_0000974301
Haemonchus placei
HPLM_0000974301
I
0.764
CJA28065
Caenorhabditis japonica
CJA28065
I
0.762
L889_g6696
Steinernema feltiae
L889_g6696
I
0.757
CBG09320
Caenorhabditis briggsae
CBG09320
I
0.752
CRE31070
Caenorhabditis remanei
CRE31070
I
0.752