L893_g16225 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g16225 T309332_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.993 0.943
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.993 0.943
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.921 0.686
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA

TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.764 0.543
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA

TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.764 0.543
VDR
M05877_2.00
Homo sapiens
HRRGTTCA

TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.764 0.543
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.764 0.543
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR

YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.764 0.543
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN

NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.764 0.543
VDR
M11116_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.764 0.543
VDR
M11117_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.764 0.543
VDR
M11118_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.764 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g16225.t1 Nuclear receptor 231 302
L893_g16225.t2 Nuclear receptor 368 439

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L596_g8771 Steinernema carpocapsae L596_g8771 I 0.993
DME_0000943901 Dracunculus medinensis DME_0000943901 I 0.993
EVEC_0001257601 Enterobius vermicularis EVEC_0001257601 I 0.993
CRE07237 Caenorhabditis remanei CRE07237 I 0.993
LOAG_10538 Loa loa LOAG_10538 I 0.993
TELCIR_05516 Teladorsagia circumcincta TELCIR_05516 I 0.993
BXY_1418300 Bursaphelenchus xylophilus BXY_1418300 I 0.993
ASU_07898 Ascaris suum ASU_07898 I 0.993
ACOC_0000064201 Angiostrongylus costaricensis ACOC_0000064201 I 0.993
scaffold61-EXSNAP2012.64 Pristionchus exspectatus scaffold61-EXSNAP2012.64 I 0.993
ANCCAN_15412 Ancylostoma caninum ANCCAN_15412 I 0.993
TCLT_0000386701 Thelazia callipaeda TCLT_0000386701 I 0.993
ASIM_0001146101 Anisakis simplex ASIM_0001146101 I 0.993
ANCDUO_17434 Ancylostoma duodenale ANCDUO_17434 I 0.993
CJA11532 Caenorhabditis japonica CJA11532 I 0.993
L889_g10853 Steinernema feltiae L889_g10853 I 0.993
CBG04512 Caenorhabditis briggsae CBG04512 I 0.993
L898_g10498 Steinernema monticolum L898_g10498 I 0.993
WBGene00239037 Onchocerca volvulus WBGene00239037 I 0.993
WUBG_12640 Wuchereria bancrofti WUBG_12640 I 0.993
daf-12 Caenorhabditis elegans WBGene00000908 D 0.993
nDi.2.2.2.g09652 Dirofilaria immitis nDi.2.2.2.g09652 I 0.993
SMUV_0001002101 Syphacia muris SMUV_0001002101 I 0.993
CBN31767 Caenorhabditis brenneri CBN31767 I 0.993
SSTP_0001172300 Strongyloides stercoralis SSTP_0001172300 I 0.992
L892_g18386 Steinernema scapterisci L892_g18386 I 0.992
SPAL_0001591300 Strongyloides papillosus SPAL_0001591300 I 0.992
SVE_0996600 Strongyloides venezuelensis SVE_0996600 I 0.992
PTRK_0001378700 Parastrongyloides trichosuri PTRK_0001378700 I 0.992
RSKR_0001015700 Rhabditophanes kr3021 RSKR_0001015700 I 0.990
ANCCEY_01199 Ancylostoma ceylanicum ANCCEY_01199 I 0.990
ACAC_0000565201 Angiostrongylus cantonensis ACAC_0000565201 I 0.979
CBN08904 Caenorhabditis brenneri CBN08904 I 0.977
OFLC_0000598101 Onchocerca flexuosa OFLC_0000598101 I 0.975
CGOC_0000057501 Cylicostephanus goldi CGOC_0000057501 I 0.953
NBR_0000856001 Nippostrongylus brasiliensis NBR_0000856001 I 0.940
GG11347 Drosophila erecta FBgn0103647 I 0.921
GE23543 Drosophila yakuba FBgn0240719 I 0.921
Hr96 Drosophila melanogaster FBgn0015240 D 0.921
GF16320 Drosophila ananassae FBgn0093341 I 0.921
GM17786 Drosophila sechellia FBgn0172693 I 0.921
GD21158 Drosophila simulans FBgn0192609 I 0.921
ADAC003041 Anopheles darlingi ADAC003041 I 0.915
GK14276 Drosophila willistoni FBgn0216282 I 0.915
AALB008395 Anopheles albimanus AALB008395 I 0.915
Hr96 Drosophila grimshawi FBgn0020174 I 0.913
GA11197 Drosophila pseudoobscura FBgn0071252 I 0.913
GJ24344 Drosophila virilis FBgn0211424 I 0.913
GI22223 Drosophila mojavensis FBgn0144951 I 0.913
LCUP002913 Lucilia cuprina LCUP002913 I 0.913
MDOA002084 Musca domestica MDOA002084 I 0.913
ACOM033140 Anopheles coluzzii ACOM033140 I 0.912
AATE006049 Anopheles atroparvus AATE006049 I 0.912
AARA011580 Anopheles arabiensis AARA011580 I 0.912
ACUA008166 Anopheles culicifacies ACUA008166 I 0.912
AMIN004130 Anopheles minimus AMIN004130 I 0.912
AQUA008824 Anopheles quadriannulatus AQUA008824 I 0.912
ASIS011648 Anopheles sinensis ASIS011648 I 0.912
ASTEI03690 Anopheles stephensi ASTEI03690 I 0.912
AGAP004224 Anopheles gambiae AGAP004224 I 0.912
AMEM008752 Anopheles merus AMEM008752 I 0.912
AMEC016766 Anopheles melas AMEC016766 I 0.912
AFUN010189 Anopheles funestus AFUN010189 I 0.912
AMAM022585 Anopheles maculatus AMAM022585 I 0.912
AEPI000232 Anopheles epiroticus AEPI000232 I 0.910
HR96 Aedes aegypti AAEL007202 I 0.906
CpipJ_CPIJ016038 Culex pipiens CpipJ_CPIJ016038 I 0.906
CPIJ016038 Culex quinquefasciatus CPIJ016038 I 0.906
L798_15710 Zootermopsis nevadensis L798_15710 I 0.900
nLs.2.1.2.g07694 Litomosoides sigmodontis nLs.2.1.2.g07694 I 0.898
nAv.1.0.1.g08097 Acanthocheilonema viteae nAv.1.0.1.g08097 I 0.898
AFAF019254 Anopheles farauti AFAF019254 I 0.898
ADIR005534 Anopheles dirus ADIR005534 I 0.895
DAPPUDRAFT_303110 Daphnia pulex DAPPUDRAFT_303110 I 0.895
LDEC005794 Leptinotarsa decemlineata LDEC005794 I 0.891
TC010645 Tribolium castaneum TC010645 I 0.889
YQE_04331 Dendroctonus ponderosae YQE_04331 I 0.884
Hsal_04850--XP_624213.2_APIME Harpegnathos saltator Hsal_04850--XP_624213.2_APIME I 0.883
NV10187 Nasonia vitripennis NV10187 I 0.883
GB52904 Apis mellifera GB52904 I 0.883
Cflo_03542--XP_624213.2_APIME Camponotus floridanus Cflo_03542--XP_624213.2_APIME I 0.880
CBN26095 Caenorhabditis brenneri CBN26095 I 0.873
PPAI005921 Phlebotomus papatasi PPAI005921 I 0.871
HHAL000201-PA Halyomorpha halys HHAL000201-PA I 0.870
BGIBMGA010782 Bombyx mori BGIBMGA010782 I 0.865
HMEL016865 Heliconius melpomene HMEL016865 I 0.865
KGM_05575 Danaus plexippus KGM_05575 I 0.865
HPBE_0001028701 Heligmosomoides bakeri HPBE_0001028701 I 0.863
SMAR007355 Strigamia maritima SMAR007355 I 0.862
CLEC000589 Cimex lectularius CLEC000589 I 0.856
PHUM460970 Pediculus humanus PHUM460970 I 0.855
ACEP16468 Atta cephalotes ACEP16468 I 0.851
tetur17g03630 Tetranychus urticae tetur17g03630 I 0.847
ISCW009328 Ixodes scapularis ISCW009328 I 0.845
tetur34g00750 Tetranychus urticae tetur34g00750 I 0.839
vdr-a Ciona intestinalis ENSCING00000020740 I 0.836
RPRC001794 Rhodnius prolixus RPRC001794 I 0.831
PTRK_0001132000 Parastrongyloides trichosuri PTRK_0001132000 I 0.811
SPAL_0000150000 Strongyloides papillosus SPAL_0000150000 I 0.808
SSTP_0001272200 Strongyloides stercoralis SSTP_0001272200 I 0.808
SVE_0958300 Strongyloides venezuelensis SVE_0958300 I 0.808
nDi.2.2.2.g04518 Dirofilaria immitis nDi.2.2.2.g04518 I 0.788
HCOI00283900 Haemonchus contortus HCOI00283900 I 0.787
BXY_1432000 Bursaphelenchus xylophilus BXY_1432000 I 0.787
EEL_0000817201 Elaeophora elaphi EEL_0000817201 I 0.786
MhA1_Contig1158.frz3.gene18 Meloidogyne hapla MhA1_Contig1158.frz3.gene18 I 0.786
Bm3787 Brugia malayi Bm3787 I 0.786
Minc13296 Meloidogyne incognita Minc13296 I 0.786
WUBG_13334 Wuchereria bancrofti WUBG_13334 I 0.786
Minc18589 Meloidogyne incognita Minc18589 I 0.786
HPLM_0001265101 Haemonchus placei HPLM_0001265101 I 0.784
ANCCAN_22289 Ancylostoma caninum ANCCAN_22289 I 0.782
CGOC_0001446101 Cylicostephanus goldi CGOC_0001446101 I 0.782
HCOI00567800 Haemonchus contortus HCOI00567800 I 0.780
TCNE_0000258801 Toxocara canis TCNE_0000258801 I 0.778
MCINX005291 Melitaea cinxia MCINX005291 I 0.778
CRE19106 Caenorhabditis remanei CRE19106 I 0.774
CBG07759 Caenorhabditis briggsae CBG07759 I 0.774
CBN06351 Caenorhabditis brenneri CBN06351 I 0.774
CJA03214 Caenorhabditis japonica CJA03214 I 0.774
nhr-48 Caenorhabditis elegans WBGene00003638 I 0.774
L596_g9326 Steinernema carpocapsae L596_g9326 I 0.768
L892_g26350 Steinernema scapterisci L892_g26350 I 0.768
L898_g1817 Steinernema monticolum L898_g1817 I 0.768
L893_g8292 Steinernema glaseri L893_g8292 I 0.768
nAv.1.0.1.g10286 Acanthocheilonema viteae nAv.1.0.1.g10286 I 0.767
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I 0.764
VDR Bos taurus ENSBTAG00000016414 I 0.764
VDR Dasypus novemcinctus ENSDNOG00000039161 I 0.764
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I 0.764
VDR Canis familiaris ENSCAFG00000009103 I 0.764
VDR Callithrix jacchus ENSCJAG00000015018 I 0.764
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I 0.764
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I 0.764
VDR Homo sapiens ENSG00000111424 D 0.764
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I 0.764
VDR Pteropus vampyrus ENSPVAG00000011085 I 0.764
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I 0.764
VDR Otolemur garnettii ENSOGAG00000005480 I 0.764
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I 0.764
VDR Oryctolagus cuniculus ENSOCUG00000027507 I 0.764
Vdr Rattus norvegicus ENSRNOG00000054420 I 0.764
VDR Sus scrofa ENSSSCG00000020864 I 0.764
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I 0.764
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I 0.764
VDR Tursiops truncatus ENSTTRG00000012578 I 0.764
VDR Tupaia belangeri ENSTBEG00000005717 I 0.764
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I 0.764
VDR Equus caballus ENSECAG00000015822 I 0.764
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I 0.764
VDR Gorilla gorilla ENSGGOG00000016473 I 0.764
VDR Loxodonta africana ENSLAFG00000006418 I 0.764
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I 0.764
VDR Felis catus ENSFCAG00000024594 I 0.764
VDR Erinaceus europaeus ENSEEUG00000011116 I 0.764
Vdr Mus musculus ENSMUSG00000022479 D 0.764
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I 0.764
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I 0.764
VDR Microcebus murinus ENSMICG00000009017 I 0.764
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I 0.764
VDR Macaca mulatta ENSMMUG00000006727 I 0.764
VDR Myotis lucifugus ENSMLUG00000000912 I 0.764
Ppa-nhr-48 Pristionchus pacificus PPA20177 I 0.761
scaffold1545-EXSNAP2012.2 Pristionchus exspectatus scaffold1545-EXSNAP2012.2 I 0.761
Afo_R013462 Aptenodytes forsteri Afo_R013462 I 0.760
VDR Meleagris gallopavo ENSMGAG00000004846 I 0.758
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I 0.758
VDR Taeniopygia guttata ENSTGUG00000017093 I 0.758
Aan_R009572 Calypte anna Aan_R009572 I 0.758
Gfo_R005027 Geospiza fortis Gfo_R005027 I 0.754
TELCIR_04193 Teladorsagia circumcincta TELCIR_04193 I 0.754
SVUK_0001112701 Strongylus vulgaris SVUK_0001112701 I 0.751
DICVIV_03942 Dictyocaulus viviparus DICVIV_03942 I 0.751
NECAME_01947 Necator americanus NECAME_01947 I 0.751
ACAC_0001358501 Angiostrongylus cantonensis ACAC_0001358501 I 0.751
HCOI01526000 Haemonchus contortus HCOI01526000 I 0.751
TELCIR_04889 Teladorsagia circumcincta TELCIR_04889 I 0.751
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I 0.750
vdr.S Xenopus laevis XB-GENE-864847 I 0.750
CRE05362 Caenorhabditis remanei CRE05362 I 0.749
CRE12534 Caenorhabditis remanei CRE12534 I 0.749
L893_g3995 Steinernema glaseri L893_g3995 I 0.748
GPUH_0001067301 Gongylonema pulchrum GPUH_0001067301 N 0.748
vdr Xenopus tropicalis XB-GENE-486505 I 0.747