CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L893_g16225
(
Steinernema glaseri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L893_g16225
T309332_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.993
0.943
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.993
0.943
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR
YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.921
0.686
VDR
M03363_2.00
Homo sapiens
GRGTTCAYHGRGTTCA
TGAACYCDRTGAACYC
SELEX
Jolma et al.(2013)
VDR_1
0.764
0.543
Vdr
M03429_2.00
Mus musculus
RRGTTCAYHGRGTTCA
TGAACYCDRTGAACYY
SELEX
Jolma et al.(2013)
Vdr_1
0.764
0.543
VDR
M05877_2.00
Homo sapiens
HRRGTTCA
TGAACYYD
SMiLE-seq
Isakova et al.(2017)
VDR
0.764
0.543
VDR
M09269_2.00
Homo sapiens
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A
0.764
0.543
Vdr
M09315_2.00
Mus musculus
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN
Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A
0.764
0.543
VDR
M09606_2.00
Homo sapiens
NRRGGTCANNRRGKKCANNN
NNNTGMMCYYNNTGACCYYN
Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484
0.764
0.543
VDR
M11116_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q3
0.764
0.543
VDR
M11117_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6_01
0.764
0.543
VDR
M11118_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VDR_Q6
0.764
0.543
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L893_g16225.t1
Nuclear receptor
231
302
KTCRVCGDHATGYNFNVITCESCKAFFRRNALRPKLQEFKCPYSDDCEINAVSRRFCQKCRLRKCFNVGMKK
L893_g16225.t2
Nuclear receptor
368
439
KTCRVCGDHATGYNFNVITCESCKAFFRRNALRPKLQEFKCPYSDDCEINAVSRRFCQKCRLRKCFNVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Steinernema glaseri
TFs
185 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g8771
Steinernema carpocapsae
L596_g8771
I
0.993
DME_0000943901
Dracunculus medinensis
DME_0000943901
I
0.993
EVEC_0001257601
Enterobius vermicularis
EVEC_0001257601
I
0.993
CRE07237
Caenorhabditis remanei
CRE07237
I
0.993
LOAG_10538
Loa loa
LOAG_10538
I
0.993
TELCIR_05516
Teladorsagia circumcincta
TELCIR_05516
I
0.993
BXY_1418300
Bursaphelenchus xylophilus
BXY_1418300
I
0.993
ASU_07898
Ascaris suum
ASU_07898
I
0.993
ACOC_0000064201
Angiostrongylus costaricensis
ACOC_0000064201
I
0.993
scaffold61-EXSNAP2012.64
Pristionchus exspectatus
scaffold61-EXSNAP2012.64
I
0.993
ANCCAN_15412
Ancylostoma caninum
ANCCAN_15412
I
0.993
TCLT_0000386701
Thelazia callipaeda
TCLT_0000386701
I
0.993
ASIM_0001146101
Anisakis simplex
ASIM_0001146101
I
0.993
ANCDUO_17434
Ancylostoma duodenale
ANCDUO_17434
I
0.993
CJA11532
Caenorhabditis japonica
CJA11532
I
0.993
L889_g10853
Steinernema feltiae
L889_g10853
I
0.993
CBG04512
Caenorhabditis briggsae
CBG04512
I
0.993
L898_g10498
Steinernema monticolum
L898_g10498
I
0.993
WBGene00239037
Onchocerca volvulus
WBGene00239037
I
0.993
WUBG_12640
Wuchereria bancrofti
WUBG_12640
I
0.993
daf-12
Caenorhabditis elegans
WBGene00000908
D
0.993
nDi.2.2.2.g09652
Dirofilaria immitis
nDi.2.2.2.g09652
I
0.993
SMUV_0001002101
Syphacia muris
SMUV_0001002101
I
0.993
CBN31767
Caenorhabditis brenneri
CBN31767
I
0.993
SSTP_0001172300
Strongyloides stercoralis
SSTP_0001172300
I
0.992
L892_g18386
Steinernema scapterisci
L892_g18386
I
0.992
SPAL_0001591300
Strongyloides papillosus
SPAL_0001591300
I
0.992
SVE_0996600
Strongyloides venezuelensis
SVE_0996600
I
0.992
PTRK_0001378700
Parastrongyloides trichosuri
PTRK_0001378700
I
0.992
RSKR_0001015700
Rhabditophanes kr3021
RSKR_0001015700
I
0.990
ANCCEY_01199
Ancylostoma ceylanicum
ANCCEY_01199
I
0.990
ACAC_0000565201
Angiostrongylus cantonensis
ACAC_0000565201
I
0.979
CBN08904
Caenorhabditis brenneri
CBN08904
I
0.977
OFLC_0000598101
Onchocerca flexuosa
OFLC_0000598101
I
0.975
CGOC_0000057501
Cylicostephanus goldi
CGOC_0000057501
I
0.953
NBR_0000856001
Nippostrongylus brasiliensis
NBR_0000856001
I
0.940
GG11347
Drosophila erecta
FBgn0103647
I
0.921
GE23543
Drosophila yakuba
FBgn0240719
I
0.921
Hr96
Drosophila melanogaster
FBgn0015240
D
0.921
GF16320
Drosophila ananassae
FBgn0093341
I
0.921
GM17786
Drosophila sechellia
FBgn0172693
I
0.921
GD21158
Drosophila simulans
FBgn0192609
I
0.921
ADAC003041
Anopheles darlingi
ADAC003041
I
0.915
GK14276
Drosophila willistoni
FBgn0216282
I
0.915
AALB008395
Anopheles albimanus
AALB008395
I
0.915
Hr96
Drosophila grimshawi
FBgn0020174
I
0.913
GA11197
Drosophila pseudoobscura
FBgn0071252
I
0.913
GJ24344
Drosophila virilis
FBgn0211424
I
0.913
GI22223
Drosophila mojavensis
FBgn0144951
I
0.913
LCUP002913
Lucilia cuprina
LCUP002913
I
0.913
MDOA002084
Musca domestica
MDOA002084
I
0.913
ACOM033140
Anopheles coluzzii
ACOM033140
I
0.912
AATE006049
Anopheles atroparvus
AATE006049
I
0.912
AARA011580
Anopheles arabiensis
AARA011580
I
0.912
ACUA008166
Anopheles culicifacies
ACUA008166
I
0.912
AMIN004130
Anopheles minimus
AMIN004130
I
0.912
AQUA008824
Anopheles quadriannulatus
AQUA008824
I
0.912
ASIS011648
Anopheles sinensis
ASIS011648
I
0.912
ASTEI03690
Anopheles stephensi
ASTEI03690
I
0.912
AGAP004224
Anopheles gambiae
AGAP004224
I
0.912
AMEM008752
Anopheles merus
AMEM008752
I
0.912
AMEC016766
Anopheles melas
AMEC016766
I
0.912
AFUN010189
Anopheles funestus
AFUN010189
I
0.912
AMAM022585
Anopheles maculatus
AMAM022585
I
0.912
AEPI000232
Anopheles epiroticus
AEPI000232
I
0.910
HR96
Aedes aegypti
AAEL007202
I
0.906
CpipJ_CPIJ016038
Culex pipiens
CpipJ_CPIJ016038
I
0.906
CPIJ016038
Culex quinquefasciatus
CPIJ016038
I
0.906
L798_15710
Zootermopsis nevadensis
L798_15710
I
0.900
nLs.2.1.2.g07694
Litomosoides sigmodontis
nLs.2.1.2.g07694
I
0.898
nAv.1.0.1.g08097
Acanthocheilonema viteae
nAv.1.0.1.g08097
I
0.898
AFAF019254
Anopheles farauti
AFAF019254
I
0.898
ADIR005534
Anopheles dirus
ADIR005534
I
0.895
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
0.895
LDEC005794
Leptinotarsa decemlineata
LDEC005794
I
0.891
TC010645
Tribolium castaneum
TC010645
I
0.889
YQE_04331
Dendroctonus ponderosae
YQE_04331
I
0.884
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
0.883
NV10187
Nasonia vitripennis
NV10187
I
0.883
GB52904
Apis mellifera
GB52904
I
0.883
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
0.880
CBN26095
Caenorhabditis brenneri
CBN26095
I
0.873
PPAI005921
Phlebotomus papatasi
PPAI005921
I
0.871
HHAL000201-PA
Halyomorpha halys
HHAL000201-PA
I
0.870
BGIBMGA010782
Bombyx mori
BGIBMGA010782
I
0.865
HMEL016865
Heliconius melpomene
HMEL016865
I
0.865
KGM_05575
Danaus plexippus
KGM_05575
I
0.865
HPBE_0001028701
Heligmosomoides bakeri
HPBE_0001028701
I
0.863
SMAR007355
Strigamia maritima
SMAR007355
I
0.862
CLEC000589
Cimex lectularius
CLEC000589
I
0.856
PHUM460970
Pediculus humanus
PHUM460970
I
0.855
ACEP16468
Atta cephalotes
ACEP16468
I
0.851
tetur17g03630
Tetranychus urticae
tetur17g03630
I
0.847
ISCW009328
Ixodes scapularis
ISCW009328
I
0.845
tetur34g00750
Tetranychus urticae
tetur34g00750
I
0.839
vdr-a
Ciona intestinalis
ENSCING00000020740
I
0.836
RPRC001794
Rhodnius prolixus
RPRC001794
I
0.831
PTRK_0001132000
Parastrongyloides trichosuri
PTRK_0001132000
I
0.811
SPAL_0000150000
Strongyloides papillosus
SPAL_0000150000
I
0.808
SSTP_0001272200
Strongyloides stercoralis
SSTP_0001272200
I
0.808
SVE_0958300
Strongyloides venezuelensis
SVE_0958300
I
0.808
nDi.2.2.2.g04518
Dirofilaria immitis
nDi.2.2.2.g04518
I
0.788
HCOI00283900
Haemonchus contortus
HCOI00283900
I
0.787
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
0.787
EEL_0000817201
Elaeophora elaphi
EEL_0000817201
I
0.786
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
0.786
Bm3787
Brugia malayi
Bm3787
I
0.786
Minc13296
Meloidogyne incognita
Minc13296
I
0.786
WUBG_13334
Wuchereria bancrofti
WUBG_13334
I
0.786
Minc18589
Meloidogyne incognita
Minc18589
I
0.786
HPLM_0001265101
Haemonchus placei
HPLM_0001265101
I
0.784
ANCCAN_22289
Ancylostoma caninum
ANCCAN_22289
I
0.782
CGOC_0001446101
Cylicostephanus goldi
CGOC_0001446101
I
0.782
HCOI00567800
Haemonchus contortus
HCOI00567800
I
0.780
TCNE_0000258801
Toxocara canis
TCNE_0000258801
I
0.778
MCINX005291
Melitaea cinxia
MCINX005291
I
0.778
CRE19106
Caenorhabditis remanei
CRE19106
I
0.774
CBG07759
Caenorhabditis briggsae
CBG07759
I
0.774
CBN06351
Caenorhabditis brenneri
CBN06351
I
0.774
CJA03214
Caenorhabditis japonica
CJA03214
I
0.774
nhr-48
Caenorhabditis elegans
WBGene00003638
I
0.774
L596_g9326
Steinernema carpocapsae
L596_g9326
I
0.768
L892_g26350
Steinernema scapterisci
L892_g26350
I
0.768
L898_g1817
Steinernema monticolum
L898_g1817
I
0.768
L893_g8292
Steinernema glaseri
L893_g8292
I
0.768
nAv.1.0.1.g10286
Acanthocheilonema viteae
nAv.1.0.1.g10286
I
0.767
ENSCSAG00000006576
Chlorocebus sabaeus
ENSCSAG00000006576
I
0.764
VDR
Bos taurus
ENSBTAG00000016414
I
0.764
VDR
Dasypus novemcinctus
ENSDNOG00000039161
I
0.764
ENSAMEG00000013706
Ailuropoda melanoleuca
ENSAMEG00000013706
I
0.764
VDR
Canis familiaris
ENSCAFG00000009103
I
0.764
VDR
Callithrix jacchus
ENSCJAG00000015018
I
0.764
ENSCHOG00000008514
Choloepus hoffmanni
ENSCHOG00000008514
I
0.764
ENSCPOG00000006025
Cavia porcellus
ENSCPOG00000006025
I
0.764
VDR
Homo sapiens
ENSG00000111424
D
0.764
ENSPPYG00000004448
Pongo abelii
ENSPPYG00000004448
I
0.764
VDR
Pteropus vampyrus
ENSPVAG00000011085
I
0.764
ENSPANG00000011327
Papio anubis
ENSPANG00000011327
I
0.764
VDR
Otolemur garnettii
ENSOGAG00000005480
I
0.764
ENSOARG00000019372
Ovis aries
ENSOARG00000019372
I
0.764
VDR
Oryctolagus cuniculus
ENSOCUG00000027507
I
0.764
Vdr
Rattus norvegicus
ENSRNOG00000054420
I
0.764
VDR
Sus scrofa
ENSSSCG00000020864
I
0.764
ENSMMUP00000008847
Macaca fascicularis
ENSMMUP00000008847
I
0.764
ENSP00000229022-D1
Bos grunniens
ENSP00000229022-D1
I
0.764
VDR
Tursiops truncatus
ENSTTRG00000012578
I
0.764
VDR
Tupaia belangeri
ENSTBEG00000005717
I
0.764
ENSSTOG00000026741
Ictidomys tridecemlineatus
ENSSTOG00000026741
I
0.764
VDR
Equus caballus
ENSECAG00000015822
I
0.764
ENSNLEG00000017900
Nomascus leucogenys
ENSNLEG00000017900
I
0.764
VDR
Gorilla gorilla
ENSGGOG00000016473
I
0.764
VDR
Loxodonta africana
ENSLAFG00000006418
I
0.764
Myotis_brandtii_VDR_10022134
Myotis brandtii
Myotis_brandtii_VDR_10022134
I
0.764
VDR
Felis catus
ENSFCAG00000024594
I
0.764
VDR
Erinaceus europaeus
ENSEEUG00000011116
I
0.764
Vdr
Mus musculus
ENSMUSG00000022479
D
0.764
ENSMEUG00000014791
Macropus eugenii
ENSMEUG00000014791
I
0.764
ENSMPUG00000000419
Mustela putorius furo
ENSMPUG00000000419
I
0.764
VDR
Microcebus murinus
ENSMICG00000009017
I
0.764
ENSMODG00000028774
Monodelphis domestica
ENSMODG00000028774
I
0.764
VDR
Macaca mulatta
ENSMMUG00000006727
I
0.764
VDR
Myotis lucifugus
ENSMLUG00000000912
I
0.764
Ppa-nhr-48
Pristionchus pacificus
PPA20177
I
0.761
scaffold1545-EXSNAP2012.2
Pristionchus exspectatus
scaffold1545-EXSNAP2012.2
I
0.761
Afo_R013462
Aptenodytes forsteri
Afo_R013462
I
0.760
VDR
Meleagris gallopavo
ENSMGAG00000004846
I
0.758
ENSGALG00000026166
Gallus gallus
ENSGALG00000026166
I
0.758
VDR
Taeniopygia guttata
ENSTGUG00000017093
I
0.758
Aan_R009572
Calypte anna
Aan_R009572
I
0.758
Gfo_R005027
Geospiza fortis
Gfo_R005027
I
0.754
TELCIR_04193
Teladorsagia circumcincta
TELCIR_04193
I
0.754
SVUK_0001112701
Strongylus vulgaris
SVUK_0001112701
I
0.751
DICVIV_03942
Dictyocaulus viviparus
DICVIV_03942
I
0.751
NECAME_01947
Necator americanus
NECAME_01947
I
0.751
ACAC_0001358501
Angiostrongylus cantonensis
ACAC_0001358501
I
0.751
HCOI01526000
Haemonchus contortus
HCOI01526000
I
0.751
TELCIR_04889
Teladorsagia circumcincta
TELCIR_04889
I
0.751
ENSPMAG00000003695
Petromyzon marinus
ENSPMAG00000003695
I
0.750
vdr.S
Xenopus laevis
XB-GENE-864847
I
0.750
CRE05362
Caenorhabditis remanei
CRE05362
I
0.749
CRE12534
Caenorhabditis remanei
CRE12534
I
0.749
L893_g3995
Steinernema glaseri
L893_g3995
I
0.748
GPUH_0001067301
Gongylonema pulchrum
GPUH_0001067301
N
0.748
vdr
Xenopus tropicalis
XB-GENE-486505
I
0.747