L893_g6878 (Steinernema glaseri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L893_g6878 T309398_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN

NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.891 0.629
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN

NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.830 0.586
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.780 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g6878.t1 Nuclear receptor 5 74
L893_g6878.t2 Nuclear receptor 5 74
L893_g6878.t3 Nuclear receptor 5 74

Links

Other Nuclear receptor family TFs
Other Steinernema glaseri TFs

Invalid Input OrderBy

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action